Pairwise Alignments

Query, 250 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 520 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  256 bits (655), Expect = 5e-73
 Identities = 124/240 (51%), Positives = 183/240 (76%), Gaps = 3/240 (1%)

Query: 5   LQLAASPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALVLRLG 64
           ++  A PTAW+ L TLIV+E+VLGIDNL+FI+IL +KLP + R +AR IG+S+AL++RLG
Sbjct: 1   MEWLADPTAWLGLLTLIVLELVLGIDNLVFIAILADKLPPEQRDRARLIGLSLALLMRLG 60

Query: 65  LLSTIAFIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEKETSA 124
           LL++I+++V LT P+FEVF ++FS +D+I++ GG+FL++KAT E+H  ++    ++    
Sbjct: 61  LLASISWLVTLTQPLFEVFDKSFSGRDLIMLFGGVFLLFKATMELHERLEGHVAQR---T 117

Query: 125 GNVVAIGFAAAIGQILLLDLVFSIDSIITAVGMTEHLPIMIIAVVTSVIVMLVAAEPLAK 184
           GNV    F   + QI++LD VFS+D++ITAVGM + L +M+IAV+ S+ +M+VA++PL +
Sbjct: 118 GNVAYAMFWPIVAQIVVLDAVFSLDAVITAVGMVDELAVMMIAVIVSIGLMIVASKPLTR 177

Query: 185 FINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIECLNIARRNRHKR 244
           F+N +PTV+ML LGFL+MIG  L AEG G H+PKGY+YAA+ FS  IE  N   R+R K+
Sbjct: 178 FVNAHPTVIMLCLGFLMMIGFALTAEGLGFHIPKGYLYAAIGFSILIEVFNQIARSRRKK 237