Pairwise Alignments

Query, 250 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 250 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  383 bits (984), Expect = e-111
 Identities = 198/245 (80%), Positives = 222/245 (90%), Gaps = 1/245 (0%)

Query: 1   MDYLLQLAASPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALV 60
           M+YLL+LAASPTAWVALATL+ ME+VLGIDNLIFISILTNKLP ++R+KARRIGISMALV
Sbjct: 1   MEYLLELAASPTAWVALATLVAMEVVLGIDNLIFISILTNKLPVEYRSKARRIGISMALV 60

Query: 61  LRLGLLSTIAFIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEK 120
           +RL LLST+A+IVQLT PVFEVFG AFSWKD+ILIAGGLFL+WKAT EIH ++DP   ++
Sbjct: 61  MRLALLSTVAWIVQLTDPVFEVFGNAFSWKDVILIAGGLFLLWKATKEIHENVDPHGAKE 120

Query: 121 ETSAGNVVAIGFAAAIGQILLLDLVFSIDSIITAVGMTEHLPIMIIAVVTSVIVMLVAAE 180
           E    + V +GFAAAI QILLLD+VFS+DSIITAVGMTEHLPIMIIAV+T+VIVM+VAA+
Sbjct: 121 EAKVSSTVTLGFAAAIFQILLLDIVFSVDSIITAVGMTEHLPIMIIAVITAVIVMMVAAD 180

Query: 181 PLAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIECLNI-ARR 239
           PLA FINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFS AIE LNI ARR
Sbjct: 181 PLANFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSTAIEVLNILARR 240

Query: 240 NRHKR 244
            R KR
Sbjct: 241 ARLKR 245