Pairwise Alignments

Query, 250 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 265 a.a., putative transport protein from Pseudomonas putida KT2440

 Score =  230 bits (586), Expect = 3e-65
 Identities = 116/240 (48%), Positives = 167/240 (69%), Gaps = 2/240 (0%)

Query: 5   LQLAASPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALVLRLG 64
           ++   SP  WVA  TL  +EIVLGIDN+I ISIL +++P+  + + R  G+++A+V R+ 
Sbjct: 10  MEWLTSPEIWVAFFTLTALEIVLGIDNIIMISILVSRMPKHMQPRTRIFGLALAMVTRIM 69

Query: 65  LLSTIAFIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEKETSA 124
           LL +I ++++LTA +F VFGQ  S +D+IL  GGLFL+WK++ EI+H ++ E E  E   
Sbjct: 70  LLLSITWVMRLTADLFVVFGQGISGRDLILFFGGLFLLWKSSQEIYHGLEGEDENVEEPK 129

Query: 125 GNVVAIGFAAAIGQILLLDLVFSIDSIITAVGMTEHLPIMIIAVVTSVIVMLVAAEPLAK 184
           G      F   I QI ++D+VFS+DS+ITAVGM  H+P+MI A+V +V+VM++ A  ++ 
Sbjct: 130 G--AGGKFFYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMIAAIVVAVLVMMLCAGAISN 187

Query: 185 FINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIECLNIARRNRHKR 244
           FI+ +P++ MLAL FLI++G  LIAE F  HVPKGYVY AMAFS A+E +NI  R    R
Sbjct: 188 FIDKHPSLKMLALSFLIVVGTVLIAEAFEVHVPKGYVYFAMAFSLAVEAINIRMRTAMAR 247