Pairwise Alignments

Query, 250 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 518 a.a., putative membrane protein/conserved protein from Escherichia coli BL21

 Score =  253 bits (647), Expect = 4e-72
 Identities = 127/248 (51%), Positives = 182/248 (73%), Gaps = 6/248 (2%)

Query: 5   LQLAASPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALVLRLG 64
           ++    P+ W  L TL+V+EIVLGIDNL+FI+IL +KLP + R KAR +G+S+AL++RLG
Sbjct: 1   MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLG 60

Query: 65  LLSTIAFIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEKETSA 124
           LLS I+++V LT P+F V   +FS +D+I++ GG+FL++KATTE+H  ++    +     
Sbjct: 61  LLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGK 120

Query: 125 GNVVAIGFAAAIGQILLLDLVFSIDSIITAVGMTEHLPIMIIAVVTSVIVMLVAAEPLAK 184
           G      F   + QI++LD VFS+D++ITAVGM  HLP+M+ AVV ++ VML+A++PL +
Sbjct: 121 GYA---SFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTR 177

Query: 185 FINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIECLN-IARRN--R 241
           F+N +PTVV+L L FL+MIG++L+AEGFG H+PKGY+YAA+ FS  IE  N IARRN  R
Sbjct: 178 FVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIR 237

Query: 242 HKRLLAAR 249
           H+  L  R
Sbjct: 238 HQSTLPLR 245