Pairwise Alignments

Query, 250 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 253 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  348 bits (893), Expect = e-101
 Identities = 178/244 (72%), Positives = 204/244 (83%), Gaps = 1/244 (0%)

Query: 1   MDYLLQLAASPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALV 60
           M+ +L L + P AWVAL TLIVME+VLGIDNLIFISILTNKLP + R KAR+IGI +AL+
Sbjct: 1   MESVLPLLSDPAAWVALVTLIVMEVVLGIDNLIFISILTNKLPPEQREKARKIGIGLALI 60

Query: 61  LRLGLLSTIAFIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEK 120
           +RLGLL T+A+IVQLT PVFE+FG AFSWKDMILIAGGLFL+WKAT EIHH++DPE + K
Sbjct: 61  MRLGLLGTVAWIVQLTTPVFEIFGHAFSWKDMILIAGGLFLMWKATKEIHHNVDPE-DHK 119

Query: 121 ETSAGNVVAIGFAAAIGQILLLDLVFSIDSIITAVGMTEHLPIMIIAVVTSVIVMLVAAE 180
           E   G  VA+ F AAIGQILLLDLVFS+DSIITAVGMT HLPIMI+AVV +V VML+AA 
Sbjct: 120 EDMVGGPVAMNFGAAIGQILLLDLVFSVDSIITAVGMTPHLPIMIVAVVFAVAVMLLAAT 179

Query: 181 PLAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIECLNIARRN 240
           PLA FI  NPT+VMLAL FL+MIG TLIAEG G HVPKGYVYAAMAFSA +E LN+  RN
Sbjct: 180 PLANFIERNPTIVMLALAFLMMIGTTLIAEGMGFHVPKGYVYAAMAFSALVELLNMLARN 239

Query: 241 RHKR 244
             +R
Sbjct: 240 ARQR 243