Pairwise Alignments

Query, 250 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 518 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  245 bits (625), Expect = 1e-69
 Identities = 129/244 (52%), Positives = 175/244 (71%), Gaps = 4/244 (1%)

Query: 5   LQLAASPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALVLRLG 64
           ++  A P  WV L TLIV+E+VLGIDNL+FI+IL +KLP   R KAR IG+S+ALV+RL 
Sbjct: 1   MEFLADPNIWVGLVTLIVLEVVLGIDNLVFIAILADKLPPHQRQKARMIGLSLALVMRLL 60

Query: 65  LLSTIAFIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEKETSA 124
           LL +I++IV LT P+F +   +FS +D+ILI GG FL+ K T E+H  ++ + + K+   
Sbjct: 61  LLFSISWIVTLTRPLFTISDFSFSGRDLILILGGAFLLAKGTMELHERLEGDQKPKQ--- 117

Query: 125 GNVVAIGFAAAIGQILLLDLVFSIDSIITAVGMTEHLPIMIIAVVTSVIVMLVAAEPLAK 184
           G VV   F   I QI++LD VFS+DS+ITAVGM  +L +MI AV  ++ VM+ A+ PL  
Sbjct: 118 GKVVHAVFWQVIVQIVVLDAVFSLDSVITAVGMVNNLWVMITAVCVAMAVMMAASRPLMA 177

Query: 185 FINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIECLN-IARRNRHK 243
           F++ +PTVV+L LGFL+MIG +LI EGFG H+PKGY+YAA+ FS  IE  N I RRNR +
Sbjct: 178 FVSKHPTVVILCLGFLLMIGFSLIVEGFGFHLPKGYLYAAIGFSVLIEAANQIGRRNRER 237

Query: 244 RLLA 247
           R+ A
Sbjct: 238 RITA 241