Pairwise Alignments

Query, 360 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 380 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  105 bits (262), Expect = 2e-27
 Identities = 99/373 (26%), Positives = 162/373 (43%), Gaps = 21/373 (5%)

Query: 1   MGGRIFTCIFGLGLLTLLSGCGEEKAEPKQH--SRVFVQTVQSADFAAAVTLTGDIQARV 58
           M   +F     L L   LS CG+  AE  +   ++V V+T+++   A    L+G I A  
Sbjct: 1   MSKNLFAPFCLLALTLALSACGDSAAEAPEMPLAKVRVETLEAKPLAITSELSGRIAAPR 60

Query: 59  QTDLSFRVGGKIIQRMVDVGDRVTAKQVLAKLDPKDLQTNVDSAQAQVVAEQARVKQTAA 118
             ++  RV G ++QR+   G  V    VL ++DP   + ++DSAQA +   +A   +   
Sbjct: 61  IAEVRARVAGVVMQRVFKEGHDVKQGDVLFRIDPAPFKADLDSAQANLSKAEADAFKARL 120

Query: 119 AFVRQEKLLPKGYTSRSEYDSAQAALRSSQSALAAAQAQLANAREQLGYTSLIADAPG-- 176
              R  +L+     S  +YD+A+AA+R + + +AA +A +  AR  LGY ++ A   G  
Sbjct: 121 QEQRYSQLVEGNAISGQDYDNARAAVRQTNAEVAANKAAVERARLNLGYATVTAPISGRI 180

Query: 177 --VITARQAEVGQ-------VVQATVPIFSLARDGERD-----AVFNVYESLLVEPPPDA 222
              +    A VGQ       ++Q   PI +      R+       F    SL       A
Sbjct: 181 GRALVTEGALVGQNEATPLALIQQLDPIHADLTQSTRELNDLRRAFRA-GSLKQVGQDQA 239

Query: 223 PITVSLLDNPSIKAVGKVREVTPAVAANTGTVQVKIALQALPKGMELGSVVSATANGPA- 281
             T+   D       GK+     +V   TG + ++         +  GS V         
Sbjct: 240 KATLIEDDGSLYPLPGKLLFAEISVDPGTGQIILRSEFPNPDLDLLPGSFVRVRLEQAVD 299

Query: 282 KASIELPWAALTKDLSE-PAVWLIDGDGKAQLHKVTVARYLTGKVIIGDGLKGGEKVVVA 340
           K  I +P  A+T+D +  P V L+D         V +   +  + I+  GLK G++++V 
Sbjct: 300 KQGISVPQRAITRDSAGIPMVLLLDAGQTVSQQPVELGAVINDRWIVSSGLKPGDRIIVE 359

Query: 341 GGQLLHPGMRVEI 353
           G Q   PG +VE+
Sbjct: 360 GLQHARPGEKVEV 372