Pairwise Alignments

Query, 360 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 357 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  146 bits (369), Expect = 7e-40
 Identities = 103/343 (30%), Positives = 162/343 (47%), Gaps = 3/343 (0%)

Query: 15  LTLLSGCGEEKAEPKQHSRVFVQTVQSADFAAAVTLTGDIQARVQTDLSFRVGGKIIQRM 74
           L LL  C +E     +   V VQ +  AD   + +  G+I++  ++ + F V G+I++R 
Sbjct: 12  LLLLPACRDEPQVRDERRAVAVQRI-GADAGTSTSYAGEIRSAFESQIGFEVAGRIVERR 70

Query: 75  VDVGDRVTAKQVLAKLDPKDLQTNVDSAQAQVVAEQARVKQTAAAFVRQEKLLPKGYTSR 134
           VD+G  V A Q L +LD  D    +DSA AQ  + +       A   R  +LL +G+ S 
Sbjct: 71  VDLGSSVHAGQTLLRLDNSDYARALDSAAAQSSSARTAAAVQQADLARSRELLKQGFISP 130

Query: 135 SEYDSAQAALRSSQSALAAAQAQLANAREQLGYTSLIADAPGVITARQAEVGQVVQATVP 194
           +E+D  +AA   +Q+ L AA AQ   A  QL  T L A   GV+T  Q EVGQVV A   
Sbjct: 131 AEFDQQKAAAIQAQAQLRAAGAQSGTASAQLSRTVLTAPRAGVVTQIQGEVGQVVGAGQT 190

Query: 195 IFSLARDGERDAVFNVYESLLVEPPPDAPITVSLLDNPSIKAVGKVREVTPAVAANTGTV 254
           I +LA     +    + E  L      + ++VS+  +P  +   ++R ++ A    T T 
Sbjct: 191 IVTLADPSRPEIAVALPEGSLDRIRSASRLSVSVWSSPGRRYAARLRSISGAADPATRTF 250

Query: 255 QVKIALQALPKGMELGSVVSATANGPA-KASIELPWAALTKDLSEPAVWLIDGDGK-AQL 312
             ++++ A  + + +G        G A  A++ +P  A+ +       W++D      Q 
Sbjct: 251 AARLSVDAPAQALLMGETAELRVEGAAGDAAVRVPLTAVLQSNGRAQAWVLDRRTMVVQP 310

Query: 313 HKVTVARYLTGKVIIGDGLKGGEKVVVAGGQLLHPGMRVEIAQ 355
             V +       + I  GLK GE +V AG  LL  G +V I Q
Sbjct: 311 RAVQIGAAQGDMLTIRSGLKPGETIVTAGVHLLRAGEKVRIVQ 353