Pairwise Alignments

Query, 360 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 355 a.a., Efflux membrane fusion protein, RND family from Pseudomonas putida KT2440

 Score =  172 bits (437), Expect = 9e-48
 Identities = 110/341 (32%), Positives = 174/341 (51%), Gaps = 1/341 (0%)

Query: 12  LGLLTLLSGCGEEKAEPKQHSRVFVQTVQSADFAAAVTLTGDIQARVQTDLSFRVGGKII 71
           L    LL GC  E+  P+    V    V+    +      G IQAR ++ L FRV G+I 
Sbjct: 8   LSAAVLLVGCTSEEEAPEVIRPVLSVKVEPQVQSQLGRFAGSIQARFESTLGFRVSGRIA 67

Query: 72  QRMVDVGDRVTAKQVLAKLDPKDLQTNVDSAQAQVVAEQARVKQTAAAFVRQEKLLPKGY 131
           +R +DVG +V     LA LDP D Q  + +A+  +   QA+     A   RQ++L  +G 
Sbjct: 68  RRWLDVGAQVKPGDTLATLDPTDQQNQLRAAEGDLAKVQAQWINAQADARRQQQLYDRGV 127

Query: 132 TSRSEYDSAQAALRSSQSALAAAQAQLANAREQLGYTSLIADAPGVITARQAEVGQVVQA 191
            ++++ D AQ  L+++ +AL  A++ ++ AR+QL Y++L AD   VITA QAE GQ V A
Sbjct: 128 GAQAQLDIAQTNLKTTSAALEQARSAVSQARDQLDYSTLRADHAAVITAWQAEAGQTVTA 187

Query: 192 TVPIFSLARDGERDAVFNVYESLLVEPPPDAPITVSLLDNPSIKAVGKVREVTPAVAANT 251
              + +LAR   ++AV ++   L  +       TV+   +P+I     +RE+ P   A T
Sbjct: 188 GQAVVTLARPDVKEAVIDLPIGLAEQLSKGLTFTVASQLDPTINTTASLRELEPQADATT 247

Query: 252 GTVQVKIALQALPKGMELGSVVSATANGPAKASIELPWAALTKDLSEPAVWLIDGDGK-A 310
            T + ++ L + P    LG+ +S T +       ELP +AL +   +  VW+ID   K  
Sbjct: 248 RTRRARLTLASTPAAFHLGTAISVTLSSEVSPRSELPLSALLERDGKTQVWVIDTQNKTV 307

Query: 311 QLHKVTVARYLTGKVIIGDGLKGGEKVVVAGGQLLHPGMRV 351
               V +       +++  G++ GE+VV AG   L PG +V
Sbjct: 308 ATRDVALIDRTADSIVLSAGVQPGERVVTAGVNSLKPGQKV 348