Pairwise Alignments

Query, 360 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

 Score =  186 bits (473), Expect = 6e-52
 Identities = 112/335 (33%), Positives = 178/335 (53%), Gaps = 1/335 (0%)

Query: 17  LLSGCGEEKAEPKQHSRVFVQTVQSADFAAAVTLTGDIQARVQTDLSFRVGGKIIQRMVD 76
           LL+ CG+E A P       V   Q A+ AAA +  G+++AR + +L+FR+GGK+ +R+V+
Sbjct: 17  LLAACGQEAAPPAAPRPALVVQPQPAE-AAADSYPGEVRARFEPELAFRIGGKVSKRLVE 75

Query: 77  VGDRVTAKQVLAKLDPKDLQTNVDSAQAQVVAEQARVKQTAAAFVRQEKLLPKGYTSRSE 136
            G RV A Q LA+LDP+D++  +++ +AQ+ A +A +    A   R +KLL +   S S+
Sbjct: 76  EGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEANLALVRAERDRYQKLLERQMVSHSQ 135

Query: 137 YDSAQAALRSSQSALAAAQAQLANAREQLGYTSLIADAPGVITARQAEVGQVVQATVPIF 196
           YD+A+   R+  + L  A+A+   A  Q  Y  L A   GVI  RQ EVGQVV A   +F
Sbjct: 136 YDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKRQVEVGQVVAAGQTVF 195

Query: 197 SLARDGERDAVFNVYESLLVEPPPDAPITVSLLDNPSIKAVGKVREVTPAVAANTGTVQV 256
           +LA DGER+    + E          P++V L  +P  +  G++RE++PA    + T   
Sbjct: 196 TLAADGEREVAIGLPEQQFARFAVGQPVSVELWSHPQARFQGRIRELSPAADPRSRTFAA 255

Query: 257 KIALQALPKGMELGSVVSATANGPAKASIELPWAALTKDLSEPAVWLIDGDGKAQLHKVT 316
           +IA        ELG              + +P +A+T +  +  VW ++ + + +   V 
Sbjct: 256 RIAFTTAAVPAELGQSARVFIAKDGLIPLAVPLSAVTAENGQAYVWRVNKESRLERATVR 315

Query: 317 VARYLTGKVIIGDGLKGGEKVVVAGGQLLHPGMRV 351
           +  Y +  V + +GL  G+ VV AGG +L  G  V
Sbjct: 316 LGAYGSDSVPVLEGLDPGDWVVAAGGHVLREGQEV 350