Pairwise Alignments

Query, 360 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 382 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score =  207 bits (527), Expect = 4e-58
 Identities = 134/344 (38%), Positives = 188/344 (54%), Gaps = 9/344 (2%)

Query: 12  LGLLTL----LSGCG---EEKAEPKQHSRVFVQTVQSADFAAAVTLTGDIQARVQTDLSF 64
           L LL L    L+GCG   E K +P +  R  V  V +A    A+  TG+I A  +T LSF
Sbjct: 31  LALLALAIFPLTGCGDKHENKPDPARAVRYVV--VGAAQTLPALERTGEIHAHDETTLSF 88

Query: 65  RVGGKIIQRMVDVGDRVTAKQVLAKLDPKDLQTNVDSAQAQVVAEQARVKQTAAAFVRQE 124
           R GG+I+ R VD+GDRVTA Q+LA LD    Q  +D A A     +A  +  A    R +
Sbjct: 89  RTGGRILTRSVDIGDRVTAGQLLATLDNTTGQNQLDGAAADYEGAKASAQVAALNVSRMQ 148

Query: 125 KLLPKGYTSRSEYDSAQAALRSSQSALAAAQAQLANAREQLGYTSLIADAPGVITARQAE 184
           KL+P G  +R++ DSA+A    +++ L +++A   NARE LG+T LIA   GVITA  A 
Sbjct: 149 KLMPTGAIARTQLDSARADWLVARARLKSSEAAWRNARESLGWTRLIAPQAGVITAVNAS 208

Query: 185 VGQVVQATVPIFSLARDGERDAVFNVYESLLVEPPPDAPITVSLLDNPSIKAVGKVREVT 244
            GQVV     + +LA    RD  F++     + P   A + VSLL +PS++A   +R++T
Sbjct: 209 AGQVVSDGQSVLTLATGEARDVAFDIATPDAIPPLDKAFLRVSLLSDPSVQASAALRDIT 268

Query: 245 PAVAANTGTVQVKIALQALPKGMELGSVVSATANGPAKASIELPWAALTKDLSEPAVWLI 304
           P     T T +V+  LQ  P  M LG+ V+ T    A     LP +ALT+   +PAV++I
Sbjct: 269 PQADPQTRTWRVRATLQNPPAAMALGASVTVTLPSSAPRGYTLPASALTRVGDKPAVFVI 328

Query: 305 DGDGKAQLHKVTVARYLTGKVIIGDGLKGGEKVVVAGGQLLHPG 348
               +AQL  V  A Y    V+I  GL+ G++V+ AG   L  G
Sbjct: 329 TPQSRAQLRAVVPASYTASSVMIASGLEPGDRVITAGVSTLRSG 372