Pairwise Alignments

Query, 360 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 368 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  100 bits (250), Expect = 5e-26
 Identities = 84/363 (23%), Positives = 162/363 (44%), Gaps = 22/363 (6%)

Query: 9   IFGLGLLTLLSGCGEEK----AEPKQHSRVFVQTVQSADFAAAVTLTGDIQARVQTDLSF 64
           IF +G+  ++S CG E      + +Q   V   +V S          G +    + ++  
Sbjct: 8   IFVVGVAGVVSSCGSEANTQAGQGQQVISVHATSVTSKHVTGLDLYPGTVVPLNEIEIRP 67

Query: 65  RVGGKIIQRMVDVGDRVTAKQVLAKLDPKDLQTNVDSAQAQVVAEQARVKQTAAAFVRQE 124
           +V G I +  V+ G  V   Q L ++D    Q   + AQA + + +A +++      R E
Sbjct: 68  QVSGYINKIFVEDGQEVAKGQKLYEIDRSKYQAAYEQAQATLKSAKANLERVKKDLARYE 127

Query: 125 KLLPKGYTSRSEYDSAQAALRSSQSALAAAQAQLANAREQLGYTSLIADAPGVITARQAE 184
            L  +   ++ + D A+A + +++S +++A+AQ+ +      Y+ + A   G +   Q  
Sbjct: 128 ALDKQEAIAKQQLDYAKADILTAESQVSSAEAQVRSTLTDYNYSVITAPFSGTVGISQVR 187

Query: 185 VGQVVQATVPIFSLARDG----------ERDAVFNVYESLLVEPPPDAPITVSLLDNPSI 234
           +G  V A   + +               ERD V    + +  E  PD+  T+   +N   
Sbjct: 188 LGAQVSAGQSLLNTLSSNDPVLVDFVVNERD-VRRFSKMMKNESLPDSTFTIQFGENDVY 246

Query: 235 KAVGKVREVTPAVAANTGTVQVKIAL----QALPKGMELGSVVSATANGPAKASIELPWA 290
           +  G++  +  AV   +GT+ +++      + L  GM L   V    N      I +P+ 
Sbjct: 247 RHHGELTTIDRAVGRQSGTINMRVEFPNPDRELIPGMTLNLRV---LNQDIGDQIAIPFK 303

Query: 291 ALTKDLSEPAVWLIDGDGKAQLHKVTVARYLTGKVIIGDGLKGGEKVVVAGGQLLHPGMR 350
           A+T+ + E  V+++  D       V +   +  ++++ +GLK G+K+VV G Q L  G +
Sbjct: 304 AVTEQMGEYFVYVVGDDSVVHQQNVQLGTKVGAEIVVREGLKPGQKIVVEGIQKLREGAK 363

Query: 351 VEI 353
           V+I
Sbjct: 364 VQI 366