Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., transcriptional activator NhaR from Escherichia coli ECRC101

 Score =  203 bits (516), Expect = 4e-57
 Identities = 116/296 (39%), Positives = 169/296 (57%), Gaps = 4/296 (1%)

Query: 2   LNYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEQTFGIALFQRVGRQLELTEA 61
           +NY  L+YFW V K GS+V A E L LTPQTI+GQI  LE+     LF+R GR LE +E 
Sbjct: 4   INYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLEPSEL 63

Query: 62  GRQALPYAEQMFQTGNELEAMLRAQPNEQQILFRVGVADVVPKSIVYRLIAPTMELSEAI 121
           G     YA++MF    E+  ++  +  E  +LF VGVADV+ K +V  ++   +   E I
Sbjct: 64  GELVYRYADKMFTLSQEMLDIVNYR-KESNLLFDVGVADVLSKRLVSSVLNAAVVEGEPI 122

Query: 122 RITCREDKLERLLADLAIQRLDLVISDSPMPTHLDIKGYSQKLGECGISFFATQALADTY 181
            + C E   E LL  L+  +LD++ISD P+ +      +S ++GECG+SF+ T    +  
Sbjct: 123 HLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPPPEK- 181

Query: 182 GGDFPQCLHGAPLLIPGAETVVRSRLQRWFAEQQIQPKIIGEFDDSALMQAFGQSGSGIF 241
              FP CL    LLIPG  +++  +L  WF  Q +  +I+GEFDD+ALM+AFG   + IF
Sbjct: 182 --PFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAMHNAIF 239

Query: 242 IAPSVIADEVVRQYGVALIGQTVAVTESFYAISVERKVKHPGIVAITEGARRELFT 297
           +AP++ A +      V  IG+   V E ++AI  ER ++HP +  I       LF+
Sbjct: 240 VAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSALFS 295