Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 296 a.a., transcriptional activator NhaR from Dickeya dadantii 3937

 Score =  206 bits (524), Expect = 5e-58
 Identities = 111/283 (39%), Positives = 166/283 (58%), Gaps = 4/283 (1%)

Query: 2   LNYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEQTFGIALFQRVGRQLELTEA 61
           +N+  L+YFW V KTGS+  A E+L LTPQTI+GQI  LE+     LF+R GR LE TE 
Sbjct: 4   INFNHLYYFWQVCKTGSVAGAAERLFLTPQTITGQIKSLEERLQGKLFKRKGRGLEPTEL 63

Query: 62  GRQALPYAEQMFQTGNELEAMLRAQPNEQQILFRVGVADVVPKSIVYRLIAPTMELSEAI 121
           G+    YA++MF    E+  ++  +  E  +LF VGVAD + K +V R++   +     I
Sbjct: 64  GQLVFRYADKMFALSQEMLDIVNYR-KESSLLFDVGVADALSKRLVSRVLETVVNEQTPI 122

Query: 122 RITCREDKLERLLADLAIQRLDLVISDSPMPTHLDIKGYSQKLGECGISFFATQALADTY 181
            + C E   E L+  L+  +LD+++SD P+ +      +S+KLGECG+SF+  +   +  
Sbjct: 123 HLRCFESTHEMLIEQLSQHKLDMILSDCPVDSGQQAGLFSRKLGECGVSFYCRRPGPNL- 181

Query: 182 GGDFPQCLHGAPLLIPGAETVVRSRLQRWFAEQQIQPKIIGEFDDSALMQAFGQSGSGIF 241
              FP CL    LLIP   T++  +L  WF EQ +  +I+GEFDD+ALM AFG     IF
Sbjct: 182 --PFPACLSQRKLLIPARRTMLGRKLLNWFNEQSLPVEIMGEFDDAALMTAFGMGHDAIF 239

Query: 242 IAPSVIADEVVRQYGVALIGQTVAVTESFYAISVERKVKHPGI 284
           +APS+ A E+  Q  +  +G+   + + +Y I  ER ++HP +
Sbjct: 240 VAPSLHAREMAAQGEMMELGRLDNIQDEYYVIFAERMIQHPAV 282