Pairwise Alignments

Query, 385 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 400 a.a., Uncharacterized MFS-type transporter YtbD from Variovorax sp. SCN45

 Score =  202 bits (514), Expect = 1e-56
 Identities = 126/379 (33%), Positives = 197/379 (51%), Gaps = 7/379 (1%)

Query: 1   MLFPILLLSAAGFTVLTTEFVIVGLLPSIARDLNVSVSQAGLLVTLFAFTVAAFGPFLTA 60
           M   +L L+ + F + TTEFVIVGL+P++A DL++ +  AGLLV+L+A  VA   P LTA
Sbjct: 1   MPIALLALTLSAFAIGTTEFVIVGLIPTVAADLHIGLPSAGLLVSLYALGVAIGAPVLTA 60

Query: 61  YCARFPRKRLFISILILFGVANTVAALAPNIWVMALARLIPALGLPVFWALASETAVDIV 120
              + PRK L +S++ LF V N +A  AP+   +  AR++  L   VF+++ S  A  +V
Sbjct: 61  LTGKLPRKALLLSLMALFTVGNLLAWQAPSYESLIAARVLTGLAHGVFFSIGSTIATGLV 120

Query: 121 GPEFAGRAIEKIGFGIVCATVFGIPVGTLIADMFGWRAAFAILAVVALAKALLLFIYLPV 180
             E A  AI  +  G+  A V G+P+GT I   FGWR  F  ++ + +   +  ++++P 
Sbjct: 121 PKEKAASAIAIMFTGLTVALVTGVPLGTFIGQHFGWRETFLAVSALGVVAFIGSWVFVPS 180

Query: 181 TQPKNDEVTLRSQFKILRNPLMQGHILLSILVFSGMFTAYTYLADILERLAGFDGTLVGW 240
                   +L  Q K+L  P +      + + + G F  +T+LA IL  ++GF    VGW
Sbjct: 181 NIRHTPPASLAQQAKVLAEPRLLLVYAKTAIGYGGSFIPFTFLAPILTEVSGFSAGAVGW 240

Query: 241 CLMGFGAVGLIGNSLGGRAVDRHPLIASMVFCGFMIAGMVAL--VPAIHSTIGLAAAMAV 298
            ++ +G    +GN  GG+  DR   I ++     ++A ++ L    A H  + L A + +
Sbjct: 241 VMLVYGVSVAVGNIWGGKLADRRGPIPALKIIFALLAAVLLLFNFAAPHKWLALLAVL-M 299

Query: 299 WGVTQAAMFLVSHVRLMKAA----PHAPAFAASLNIAGANLGIGLGAMVGGHVIDTLGLG 354
           WG           V ++K A    P A   A+ LNIA  NLGI   A  GG ++  LGL 
Sbjct: 300 WGAVAFGNVPGLQVYVVKQAERFTPQAVDVASGLNIAAFNLGIAGAAWAGGLIVTHLGLM 359

Query: 355 SLGFAASGFILVSILLALW 373
              +  +  +LVS+ L  W
Sbjct: 360 HTPWIGALVVLVSLALTQW 378