Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

Subject, 307 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 16/227 (7%)

Query: 57  ALGVRGCGVSMPFKEAAIALVDELDDSVQAIDSLNTIVNTDG-HLKAYNTDYIAIEQLLK 115
           A  VRG  ++ P K   + L+D      +   S+N +  T+G  L+    D   +   L 
Sbjct: 61  ARNVRGMVIAPPHKPLVVDLLDGCGLFGRVAGSVNVVRRTEGDQLEGDLFDGEGLIGALD 120

Query: 116 KHAVP-KDSTFALRGSGGMAKAVASALRDGGYANGV--IVARNEAAGRA--LAQNLGYAW 170
              +P +     + G+G  A A+  AL +GG  NG   I   ++AAG+A  +A  L   +
Sbjct: 121 HCNIPFRGKRVLIVGAGVSAAAIGVALAEGGVVNGATHIAFYDKAAGKAAGVAAKLDAFF 180

Query: 171 RAELADMRPQ------MLINVTPIGMTGGAEADALAFDADAVDVAETVFDVVAIPSETPL 224
            A +  +         +++N TP+G+    E DAL  D   +D    +FD++     TPL
Sbjct: 181 DATVVAVDSNAPEGYDLVVNATPLGLV---EGDALPVDVARMDDHAALFDILLRNQPTPL 237

Query: 225 IVRGRAQGKRVITGLEVIAIQALEQFVLYTGVRPTDEQFQAAVAFAR 271
           +   RA+G     G E++ IQ +  ++ Y G     E  +A   F R
Sbjct: 238 VRAARARGLNAQAGFEML-IQQMPHYMRYFGHADAAEALRADADFLR 283