Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

Subject, 277 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 27/199 (13%)

Query: 60  VRGCGVSMPFKEAAIALVDELDDSVQAIDSLNTIVNT-DGHLKAYNTDYIA-IEQLLKKH 117
           +RG  V+MP K   ++LVDE+  + +   + N I+   DG L     D    +  + +K 
Sbjct: 61  LRGALVTMPHKVTTMSLVDEVTPTARVAGACNAILKRPDGTLLGDQFDGAGFVRGVERKG 120

Query: 118 AVPKDSTFALRGSGGMAKAVASALRDGGYANGVIVARNEAAGRALAQNLGYAWRAELADM 177
            + K +   + G+GG+  A+A+++   G A  ++   +EA+  ALA        A L + 
Sbjct: 121 RLFKGTRVLVSGTGGVGSAIAASIAAAGAAELMLFDMSEASAGALA--------ARLREH 172

Query: 178 RPQM--------------LINVTPIGMTGGAEADALAFDADAVDVAETVFDVVAIPSETP 223
            PQM              ++N TP+GM    E D L FD D +D    V +VV     TP
Sbjct: 173 YPQMKVATGSKDPAGYDVVVNATPLGMK---EGDPLPFDVDRIDPGTFVGEVVMKTEYTP 229

Query: 224 LIVRGRAQGKRVITGLEVI 242
           L+   +A+G +V  G +++
Sbjct: 230 LLEAAKAKGCQVQVGTDML 248