Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

Subject, 289 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

 Score = 73.2 bits (178), Expect = 6e-18
 Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 20/248 (8%)

Query: 35  GLNFYY-------KAFSSQDLPGAIGGIRALGVRGCGVSMPFKEAAIALVDELDDSVQAI 87
           GL++ Y       +      LP  +  + A G  G  ++ PFK+A I  + EL D  + +
Sbjct: 33  GLDYSYELVDVTARKLPQSSLPALLDELEARGFAGTNITHPFKQAVIPHLHELSDDARML 92

Query: 88  DSLNTIVNTDGHLKAYNTDYIAI-EQLLKKHAVPKDSTFALRGSGGMAKAVASALRDGGY 146
            ++NT+V  DG    +NTD+    E  ++     K     L G+GG   AVA A      
Sbjct: 93  GAVNTVVFRDGRRIGHNTDWYGFYESFVRGLPDAKRDRALLVGAGGAGVAVAHAALKLDI 152

Query: 147 ANGVIVARNEAAGRALAQNL------GYAWRA-ELADMRP--QMLINVTPIGMTGGAEAD 197
               I  R+      LA  L      G A+   + AD  P    LI+ TP+GM       
Sbjct: 153 IRLDIFDRDFPRAERLADELNARFGEGRAFAVKDPADSLPFADGLIHATPMGMPA---HP 209

Query: 198 ALAFDADAVDVAETVFDVVAIPSETPLIVRGRAQGKRVITGLEVIAIQALEQFVLYTGVR 257
            +   A+ ++    V D+V +P  T L+    ++G R + G  +   QA+  F L+ G  
Sbjct: 210 GMPVAAELIEQKHWVADIVYMPLVTELLATAASKGCRTLPGGGMTVFQAVGAFRLFCGRE 269

Query: 258 PTDEQFQA 265
           P  ++  A
Sbjct: 270 PDAKRMTA 277