Pairwise Alignments

Query, 355 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 353 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  110 bits (274), Expect = 7e-29
 Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 19/345 (5%)

Query: 1   MNQTNLQFKTLLLLLGLVTIAFIWILLPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNL 60
           +N   L  + LLL+L     A  W++ PF+ A+FW  +L     P+   L +  G   +L
Sbjct: 2   LNNDRLLVQILLLVL---FGASFWVMAPFWSALFWGAVLAFASWPLMVLLTRWLGGRESL 58

Query: 61  TS-LATLSACLIIAILPVIITSALL---VQEGATLYKNIESGKLDVAGYIEQFKNVLPPY 116
            + + TL   L++A LP++     L   V++   L K+I+   L  A     +   +P  
Sbjct: 59  AAGILTLGWMLLVA-LPLVWLGFNLADHVRDATALIKDIQVDGLPEA---PTWLGSIPFV 114

Query: 117 FQHLLDRFGMGNLEG--LREKIVKSAMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLYF 174
            + L+  +   + +G  L   I     Q   +   ++   G G  +  +S    L  ++F
Sbjct: 115 GERLVAMWDSIDQQGAALMVSIKPYLGQVGNWLLARSAQIGGGILELTLS----LVFVFF 170

Query: 175 LLRDGPELVRKVRTAVPLAEPQKRRLQLKFNR-VVRATVKGNVLVAVTQGALGGLIFWFL 233
             RDGP L   V   +      +    ++     V+  V G +  A  Q  L  + F   
Sbjct: 171 FYRDGPRLAMFVHRLLERLIGDRAGYYIELVAGTVQRVVNGVIGTAAAQALLALIGFLIA 230

Query: 234 DIPSALLWAVLMAFLSLLPAVGAGIVWGPVAAYFLLSGAIWQGVVLALFGVFVIGLVDNV 293
            +P AL+  ++   LSL+P +G  +VW P  A+    G     V L ++G F+I  VDNV
Sbjct: 231 GVPGALVLGIVTFLLSLIP-MGPPLVWIPATAWLAWKGDYTYAVFLGVWGTFIISGVDNV 289

Query: 294 LRPILVGKDTKMPDYLILISTLGGLSVFGLNGFVIGPLVAALFMS 338
           L+P L+ +   +P  ++L+   GGL  FG  G  IGP + A+  S
Sbjct: 290 LKPYLISRGGNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYS 334