Pairwise Alignments

Query, 355 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 350 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  108 bits (269), Expect = 3e-28
 Identities = 84/328 (25%), Positives = 141/328 (42%), Gaps = 12/328 (3%)

Query: 11  LLLLLGLVTIAFIWILLPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNLTSLATLSACL 70
           L+ LLG    A +W++ PF  A+ W  IL     P+ R L +  G    L +     A +
Sbjct: 13  LVALLG----AGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGLLTMAWI 68

Query: 71  IIAILPVIITSALLVQEGATLYKNIESGKLDVAGYIEQFKNVLPPYFQHLLDRFGMGNLE 130
           +I  LP++     L          +   ++D       +   +P   + L++ +   + +
Sbjct: 69  LIVALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNGWQSLDQK 128

Query: 131 G--LREKIVKSAMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLYFLLRDGPELVRKVRT 188
           G  L   I     Q   +   ++   G G  +  +S    L  ++F  RDGP L   V  
Sbjct: 129 GAALLTSIKPYFGQVGNWLLARSAQIGSGVLELTLS----LVFVFFFYRDGPRLAAFVLR 184

Query: 189 AVPLAEPQKRRLQLKF-NRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLWAVLMAF 247
            +     ++    L      V+  V G +  A  Q  L  + F    +P A++  ++   
Sbjct: 185 LLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLGLVTFM 244

Query: 248 LSLLPAVGAGIVWGPVAAYFLLSGAIWQGVVLALFGVFVIGLVDNVLRPILVGKDTKMPD 307
           LSL+P +G  + W P  A+ +  G     V L ++G FVI  VDNVL+P L+ +   +P 
Sbjct: 245 LSLIP-MGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRGGNLPL 303

Query: 308 YLILISTLGGLSVFGLNGFVIGPLVAAL 335
            ++L+   GGL  FG  G  IGP + A+
Sbjct: 304 VIVLLGVFGGLLAFGFIGLFIGPTLLAV 331