Pairwise Alignments

Query, 355 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 358 a.a., AI-2E family transporter from Magnetospirillum magneticum AMB-1

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 72/323 (22%), Positives = 126/323 (39%), Gaps = 31/323 (9%)

Query: 25  ILLPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNLTSLATLSACLI---IAILPVIITS 81
           ++LPF   +  A  L     P+  R++ R G +R   +LAT   CL+   +  L + + +
Sbjct: 27  VMLPFVAGMAVAYFLD----PLADRME-RAGLSR---TLATAIICLVFFGVMGLGLTLLA 78

Query: 82  ALLVQEGATLYKNIESGKLDVAGYIEQFKNVLPPYFQHLLDRFGMGNLEGLREKI---VK 138
            ++ Q+  T  + +         Y +  +    P  + +       +LE LR        
Sbjct: 79  PIIQQQVVTFVQKVPV-------YAQSLQTRAMPLLEEVYRHLSPEDLEKLRSSAGAYAG 131

Query: 139 SAMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLYFLLRDGPELVRKVRTAVPLAEPQKR 198
           +A+           S G      L   FI   + ++LLRD   +V KV   +P    +  
Sbjct: 132 TAVGWGLGVLKGVLSGGIAVMSILSLLFITPVVTFYLLRDWDHMVAKVDNWLPRHHAETI 191

Query: 199 RLQLK-FNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLWAVLMAFLSLLPAVGAG 257
           R +L+  +R +   V+G   V +      G+      +   L+  +     + +P VG  
Sbjct: 192 RFELREIDRTIAGFVRGQATVCIVLAIFYGVGLTITGLDLGLMIGLGTGLGAFVPYVGML 251

Query: 258 IVWGPVAAYFLLSGAIWQGVVLALFGVFVIGLVDNVLR-----PILVGKDTKMPDYLILI 312
           I         L  G  W      L GV ++ L+ NVL      P LVG    +    I+ 
Sbjct: 252 IGLIASVGLALAQGGEWH----LLGGVGIVFLIGNVLEGNFLTPKLVGDRVGLHPVWIIF 307

Query: 313 STLGGLSVFGLNGFVIGPLVAAL 335
           S L G ++FG  G ++    A++
Sbjct: 308 SLLAGGALFGFVGILLAVPAASV 330