Pairwise Alignments

Query, 246 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 240 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  210 bits (535), Expect = 2e-59
 Identities = 116/236 (49%), Positives = 155/236 (65%), Gaps = 6/236 (2%)

Query: 6   HIMIVDDDREIRELVGNYLKKNGLRTTVAADGRQMRALLDSTAVDLIVLDIMMPGDDGLV 65
           HI++VDDD EIR+L+  YL   G R T A DGR+M   L +  +D +VLD+M+P   GL 
Sbjct: 7   HILVVDDDLEIRKLLSRYLAAQGFRVTAAGDGREMDEKLTTQRIDFVVLDLMLPDASGLD 66

Query: 66  LCRELRAGKHKATPILMLTARNDETDRIIGLEMGADDYLVKPFAARELLARINAVLRRTR 125
           LCR LRA      P+++LTA  ++ DRIIGLE+GADDYL KPF  REL+ARI AVLRRT 
Sbjct: 67  LCRALRA--RSRVPVILLTALKEDVDRIIGLEIGADDYLGKPFNPRELVARIRAVLRRTS 124

Query: 126 SLPPNLVVSEASRLLAFGKWRLDTTARHLMDAQGTVVNLSGGEYRLLRVFVDHPQRVLSR 185
              P    S A R   F  +R +   R +  A G+ V L+G E+ LL  F++ P R+LSR
Sbjct: 125 VTDPT---SSAVRAYGFAGFRAEPDLRRVTAADGSEVPLTGAEFDLLMAFLERPGRILSR 181

Query: 186 DQLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDARDPAYVKTVRSEGYVFTYPVEI 241
           DQLL++T+GR+A  FDRS+D+LVSRLR++L D       +KT+R+ GY  +  V+I
Sbjct: 182 DQLLDITRGREAGPFDRSVDVLVSRLRRKLGDQGAF-QILKTLRNGGYQLSVRVDI 236