Pairwise Alignments

Query, 246 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 232 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  179 bits (454), Expect = 4e-50
 Identities = 103/237 (43%), Positives = 150/237 (63%), Gaps = 12/237 (5%)

Query: 1   MDH-IDHIMIVDDDREIRELVGNYLKKNGLRTTVAADG-RQMRALLDSTAVDLIVLDIMM 58
           MDH I  I+IV+DD+ + EL   YL+ NG    V ADG R  R ++DS   DL++LD+M+
Sbjct: 1   MDHPIPRILIVEDDQRLAELTAEYLQANGFEVAVEADGARAARRIIDSQP-DLVILDLML 59

Query: 59  PGDDGLVLCRELRAGKHKATPILMLTARNDETDRIIGLEMGADDYLVKPFAARELLARIN 118
           PG+DGL +CR +R+      PILMLTAR+DE D++ GL++GADDY+ KP   R LLARI 
Sbjct: 60  PGEDGLSICRRVRS--QYQGPILMLTARSDELDQVQGLDLGADDYVCKPVRPRLLLARIQ 117

Query: 119 AVLRRTRSLPPNLVVSEASRLLAFGKWRLDTTARHLMDAQGTVVNLSGGEYRLLRVFVDH 178
           A+LRR+ +      V    + LAFG  R+D   R     +  ++ L+G E+ LL +   +
Sbjct: 118 ALLRRSET------VDSKRQDLAFGALRIDNRLREARLGE-QLIELTGAEFDLLWLLASN 170

Query: 179 PQRVLSRDQLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDARDPAYVKTVRSEGYVF 235
             RVL+R+Q+    +G   D  DRSID+ +S++R ++ DD   P  +KT+RS+GY+F
Sbjct: 171 AGRVLTREQIFTALRGVGYDGQDRSIDIRISKIRPKIGDDPLQPRLIKTLRSKGYLF 227