Pairwise Alignments

Query, 246 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  219 bits (559), Expect = 3e-62
 Identities = 115/232 (49%), Positives = 157/232 (67%), Gaps = 11/232 (4%)

Query: 7   IMIVDDDREIRELVGNYLKKNGLRTTVAADGRQMRALLDSTAVDLIVLDIMMPGDDGLVL 66
           I++VDDD+EIREL+  YL ++G +    ADG+  R  L++T  DL++LD+M+P +DG  L
Sbjct: 8   ILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFSL 67

Query: 67  CRELRAGKHKA-TPILMLTARNDETDRIIGLEMGADDYLVKPFAARELLARINAVLRRT- 124
           CR +R    +A  PI+MLTA +DE DR+IGLE+GADDYL KPF+ REL ARI A+LRRT 
Sbjct: 68  CRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRTE 127

Query: 125 --RSLPPNLVVSEASRLLAFGKWRLDTTARHLMDAQGTVVNLSGGEYRLLRVFVDHPQRV 182
             ++ P N V       LAF  WRLDT +  L    G  V LSG ++ LL++F+DHPQ++
Sbjct: 128 FGQTAPGNAV-------LAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQI 180

Query: 183 LSRDQLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDARDPAYVKTVRSEGYV 234
           L RD + N T+GR+    DR +D+ VSRLRQRL D  + P  ++TVR  GY+
Sbjct: 181 LDRDTIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYL 232