Pairwise Alignments

Query, 246 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  183 bits (465), Expect = 2e-51
 Identities = 107/230 (46%), Positives = 144/230 (62%), Gaps = 3/230 (1%)

Query: 7   IMIVDDDREIRELVGNYLKKNGLRTTVAADGRQMRALLDSTAVDLIVLDIMMPGDDGLVL 66
           +++VDDD EIREL+ +YL   G     AADG+QMR  L    V+L+VLD+M+PG+DGL L
Sbjct: 5   LLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLSL 64

Query: 67  CRELRAGKHKATPILMLTARNDETDRIIGLEMGADDYLVKPFAARELLARINAVLRRTRS 126
           CR+L+A    A  ++ML+A+    DRIIGLE+GADDYL KPF  REL+ARI AVLRR + 
Sbjct: 65  CRQLQATPGLA--VIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQR 122

Query: 127 LPPNLVVSEASRLLAFGKWRLDTTARHLMDAQGTVVNLSGGEYRLLRVFVDHPQRVLSRD 186
           L  +         L F  +RL+   R L    G  + L   +YR+LR  ++   RV+SRD
Sbjct: 123 LGTSAEEPMVDAQL-FAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSRD 181

Query: 187 QLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDARDPAYVKTVRSEGYVFT 236
           QL     GRD    DRS+D+ VSRLRQ+L       A + T+R+EGY+ +
Sbjct: 182 QLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLS 231