Pairwise Alignments

Query, 271 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 236 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  154 bits (388), Expect = 2e-42
 Identities = 94/238 (39%), Positives = 135/238 (56%), Gaps = 11/238 (4%)

Query: 31  LMALVRNQAAGAYNAPHTHRHGQLLYAVSGVMRAVAQGSLWFLPPKRALWIPAEEEHDQL 90
           + AL R+   G   A H H   QL+YA SGVMR  ++G  W +P   ALW+PA   H   
Sbjct: 1   MQALERDYGHGDEVASHCHAEDQLIYAASGVMRVSSEGGSWVIPGGHALWMPAGVSHAIR 60

Query: 91  MLTPVQMRSIYIQADAAAGFGDRCRIVDVSLLLRELILVLANEPIEYELEGRN-SHVVAL 149
           M   V MR++ + A       +RC+++ VS LLRELIL  +       L  R+ +H  AL
Sbjct: 61  MKGVVCMRTLLLDAHI-----ERCQVIVVSGLLRELILAASRV-----LNLRDGAHARAL 110

Query: 150 ILSELAAARTLPLQIPWPVDRRLLVVCRAILEAPGQTHRVEYWADQVGASSRTLIRLFLK 209
           IL ELAAAR +   +P P   RL   C   L+ P Q   +E    Q+  S+R++ RLF +
Sbjct: 111 ILYELAAARRIDAFVPTPQHARLRAWCERFLQDPAQDLTLEQCGAQLNMSARSVARLFQR 170

Query: 210 ETGLTYRQWVQQVRLACALERLENGEPIGRIAQDLGYVSASAFSAMFRRAIGVSPRDF 267
           E G++Y QW  + R+  + + L +G+PI  +A + GY SASAF+AMF+R +G +P D+
Sbjct: 171 EVGMSYGQWRARARVMLSQQCLADGKPILNVALEHGYQSASAFTAMFKRILGHAPSDW 228