Pairwise Alignments

Query, 956 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 920 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  444 bits (1142), Expect = e-128
 Identities = 321/953 (33%), Positives = 485/953 (50%), Gaps = 64/953 (6%)

Query: 18  FGPFRVVPGKRLLTKDGTALDIGGRAFDLLIALLERPGRVVSKRELINLVWPDIIVEEGS 77
           FGP+R+ P +RL+ + G  L +G RA ++L+ LLE+ G VVSK+ELI  VWP  +VE+G+
Sbjct: 11  FGPYRIHPRQRLVLEAGRPLRLGRRAVEILLILLEQAGNVVSKQELIARVWPKSVVEDGN 70

Query: 78  LRFHMTGLRRILGDGEDGARYINTQVGVGYAFVAPIERAARPLPAPHSLHRGANGVGRLP 137
           LR HM  LR+ LGDG+ G RYI T    GY+FVAP+      LP   +     +    LP
Sbjct: 71  LRVHMAALRKALGDGQAGQRYIVTVAQRGYSFVAPLSIEPMTLPTEGAPQGTCHN---LP 127

Query: 138 PRPS-LIGRNADVALVMERLRQPKLFTIVGPGGVGKTSLAVET-----GHCRAEDDAVHF 191
            R + ++GR A +  ++++L + +  T+ G GG+GKT++A+       GH R   D + F
Sbjct: 128 LRRTRMLGRQALIDSLVQQLPEQRFITLTGAGGIGKTTVALRVAELLIGHYR---DGIRF 184

Query: 192 VDLAQVEGADLVPIALASSLGIAVQAEEPMQVLLAHLRSQRLLLILDNCEHLIDAVCAIV 251
           +DLA +    ++   LA+ L +     E +      L+ +++LL++DNCEHL+D +  I 
Sbjct: 185 LDLAPLSAPSMILPNLAALLDLTHTEHERLVAFARSLQERQVLLVIDNCEHLLDDIALIS 244

Query: 252 EQIQDAAPGVTLLATSREPLRARGEHVYRLNPLAFPSELQDLSVEQLLGFPAVQLFVERV 311
           E +   AP + +LATSRE LRA GE+V RL PLA P    + +  Q LG+PA+QL +ER 
Sbjct: 245 ETLLRHAPRLHILATSREALRAEGEYVQRLEPLACPPAAGNRA--QALGYPALQLLIERA 302

Query: 312 CSSNAALALAPGDARLIADMCQRLEGMALPIELAAVRVAVHGVHATHALLGERFSLGWAG 371
            S   +  L+  +  L  D+CQRL+G+ L IEL A ++   G+      + + F L   G
Sbjct: 303 MSHQDSFELSDAELPLAIDICQRLDGIPLAIELVAAQIERFGLPGLLVQMEDNFRLLTRG 362

Query: 372 RRTALPRHQTLRAMLDWSYDLLSANERLVFDRLAVFVGPFSLEAASHIAADDWIDPISVA 431
           RR+ALPRHQTLRA LDWS++LL+A E++   RLAVF G FSL +A+ + A   + P  V 
Sbjct: 363 RRSALPRHQTLRATLDWSFELLTACEQICLRRLAVFRGGFSLASAAAVIAGGQVAPTEVL 422

Query: 432 ATLDELAAKGLVTVNRSSATASYRLLEMTRAYAREKLQVRGPSEVHALAFRHAAHHMEQL 491
           A++ +L AK L+ V        YRLL++TR YA EKL V    E+ A   RH    +  +
Sbjct: 423 ASITQLVAKSLLNVEAGDDEMVYRLLDITRTYALEKLSV--AQELDATRDRHVERCLALM 480

Query: 492 KHLGETPHAIFASS--ARLGCQLGNIRSALEWSFGPQGDPGLALPLAAASAQLFLHFSLL 549
           +   E   ++   +   R      +IRSAL+W    +G+  LA+ L  ++  L+   SLL
Sbjct: 481 EQAREDWESVATQAWIDRYAPLREDIRSALDWGLAQEGEHLLAIRLTVSAMPLWQELSLL 540

Query: 550 VECRTWCTRATELLELGYFGTP-TEMELQAALGLVLMFTKGNSAAAEKALLRALDIAVSL 608
            E R +  +A  L++      P   M+LQ ALG +     G +     A + A  +A + 
Sbjct: 541 REHRLYVDKALALMDQAVSPCPRLTMQLQLALGSLSYHAMGGAPQTIAAFVSARRLADAS 600

Query: 609 GEHRSQLRLLGRLQIFYERIGDFKASLVWAERAVEIGAVIGKPDAIAVAASLAGICYHLL 668
            +   QLR +          G ++ +L  + +   +      P     A  L  +  H  
Sbjct: 601 EDVPGQLRAVSGHMAVNLCAGQYRQALAHSLQFDRLDPRT-DPQLDISAQRLRVLAQHYN 659

Query: 669 GNQPLARQTLEHSLRNSLPSQRSLTIHYG----FDHRNRTGLALARTLWLMGFPDQARHG 724
           GNQ LAR   E  ++    S       +G    +D    +   LAR LWL GFP+QA   
Sbjct: 660 GNQALARHNAEQVIQRMAHSGHLNRFAHGIGVQYDQSVASLTVLARILWLQGFPEQAWRT 719

Query: 725 ARQVETEAAALDHATTYCIALVWT-LQIYIWTGDLDTAAERLHTFKSIAEANAFGPYIAA 783
           A Q    A  ++H T+ C  L    + I  + GD D A     T +++   +A    +  
Sbjct: 720 ASQALGLAQQINHGTSICYTLALAGVVIARYNGDEDAA----QTLQALLLEHAHKHSVQL 775

Query: 784 -ATGFGAAVAIRAGRPGNAVAVLEETLARLHGMRYELLTTSFEMALAEGLILAGQFEQAL 842
             T  G    I   +    + ++E+ L                + L    + A  F++A 
Sbjct: 776 FKTWAGHYAGILGHKDLQGLGLIEDIL----------------VTLGSHAVDAPGFDRA- 818

Query: 843 AQVEATIEHCRRSGDA-FPLPELLRIQASIHKAQVPGDNKRPEALLQASLSLSQQQGSRS 901
                      R+GDA +  PE+LR+      A+   D +  EALL  +L L+ QQG+ +
Sbjct: 819 -----------RAGDAGWCTPEILRVH-----AESMTDARAAEALLLEALGLAHQQGALA 862

Query: 902 WALRSAIDLAALWQAQGRDSEAQYLLGQHREQFSEGFDTHDLRLLQARLDDAQ 954
           W LR A  LA +W +QGR   A+ LLG    +F+EGF T DL  ++  LD+ Q
Sbjct: 863 WELRCATSLAGVWLSQGRLEAARDLLGSIYARFTEGFATPDLVRVRRLLDELQ 915