Pairwise Alignments

Query, 956 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 915 a.a., winged helix-turn-helix domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score =  454 bits (1167), Expect = e-131
 Identities = 305/902 (33%), Positives = 466/902 (51%), Gaps = 36/902 (3%)

Query: 16  FAFGPFRVVPGKRLLTKDGTALDIGGRAFDLLIALLERPGRVVSKRELINLVWPDIIVEE 75
           ++FGPF + P KR L   G  + +GGRA D+L+AL+ R G +++ REL+  VWPD +V E
Sbjct: 20  YSFGPFFLFPDKRQLVCHGKQIKLGGRALDILVALVRRAGTLIAARELLAEVWPDTVVVE 79

Query: 76  GSLRFHMTGLRRILGDGEDGARYINTQVGVGYAFVAPIERA-----------ARPLPAPH 124
           GSLRFH+  LR+ L + + G  Y+    G GY FVA +  +           A PLP  H
Sbjct: 80  GSLRFHLVALRKALAESDPGVTYVMNVPGRGYTFVATVASSDALQPGIGLKNAAPLPRDH 139

Query: 125 SL--HRGANGVGRLPPRPSLIGRNADVALVMERLRQPKLFTIVGPGGVGKTSLAVETGHC 182
                RGA          S++GR  ++  ++ +L + +  +IVG GG+GKT++A      
Sbjct: 140 FRFHRRGA----------SIVGREREIDQIVRQLAEQRFVSIVGAGGMGKTTVA-NAAID 188

Query: 183 RAEDD---AVHFVDLAQVEGADLVPIALASSLGIAVQAEEPMQVLLAHLRSQRLLLILDN 239
           R  DD    V  VDL+ V+ +DLV   L ++L    ++   M  + A +   R L+ LD 
Sbjct: 189 RLRDDFEGRVVSVDLSVVQDSDLVCSTLLAALCEGRESASSMSEVCASIGHTRTLVFLDC 248

Query: 240 CEHLIDAVCAIVEQIQDAAPGVTLLATSREPLRARGEHVYRLNPLAFPSELQDLSVEQLL 299
           CEHLID V   VE +   A G+ +L TSRE +   GE V+RL PL  P   + L     L
Sbjct: 249 CEHLIDGVAKTVEVLYRNAAGIYILVTSREIVNVDGEFVFRLPPLDVPPPTEVLKARDAL 308

Query: 300 GFPAVQLFVERVCSSNAALALAPGDARLIADMCQRLEGMALPIELAAVRVAVHGVHATHA 359
            + A++LFVERV  +     L   +A+ ++ +C+ L+G+AL IELAA ++   G+     
Sbjct: 309 NYSAIRLFVERVVQAGCHFELTDDNAQAVSRLCRGLDGIALAIELAARQMPTFGLVGILE 368

Query: 360 LLGERFSLGWAGRRTALPRHQTLRAMLDWSYDLLSANERLVFDRLAVFVGPFSLEAASHI 419
           L+ ++  L W GRRTA+PRHQTL A LDWSY LL+  E++   RLAVFVG F+LEAA  +
Sbjct: 369 LVDKKSRLMWHGRRTAVPRHQTLGATLDWSYGLLTGLEQVCLRRLAVFVGCFTLEAAVAV 428

Query: 420 AADDWIDPISVAATLDELAAKGLVTVNRSSATASYRLLEMTRAYAREKLQVRGPSEVHAL 479
              + I+   V   +++L+ K L+ V        Y LL+ TR+YAR K++  G  E+  L
Sbjct: 429 IGANDIERTDVMKAINQLSNKSLLDVRLYEGAVRYFLLDTTRSYARVKMEEAG--EIDEL 486

Query: 480 AFRHAAHHMEQLKHLGETPHAIFASSARLGCQLGNIRSALEWSFGPQGDPGLALPLAAAS 539
           + RHA+ +  +            A++ RL  +LGN+R+ LEW+   + D      L  + 
Sbjct: 487 SARHASWYAARWLDDDAAEEEEEATANRL-AELGNLRAVLEWALIREQDLINGCKLVVSY 545

Query: 540 AQLFLHFSLLVECRTWCTRATELLELGYFGTPTEMELQAALGLVLMFTKGNSAAAEKALL 599
           A+L L  S+L E R W   A   L     GT  E+EL AA G  LMFT  +S A  +A  
Sbjct: 546 AKLLLKKSMLGEARKWTEIALAKLGDDERGTLMELELTAAYGQALMFTSSDSEAVGRAYE 605

Query: 600 RALDIAVSLGEHRSQLRLLGRLQIFYERIGDFKASLVWAERAVEIGAVIGKPDAIAVAAS 659
           R L IA+S+G+     RLL  L ++  R  DF  +  +A  A +  A  G+ D  AV + 
Sbjct: 606 RGLSIAMSMGDAVRHDRLLCGLIMYLYRTSDFHGAFTFASEAAQWIAASGR-DTSAVHSM 664

Query: 660 LAGICYHLLGNQPLARQTLEHSLRNSLPSQRSLT--IHYGFDHRNRTGLALARTLWLMGF 717
           LA +  H+ G+   + +  E  + +   S  +       G +   R     AR LWL G 
Sbjct: 665 LA-VALHMKGDIAASARLWEPVILSGKASGMAAVEPAELGVNPYLRALSGKARNLWLTGD 723

Query: 718 PDQARHGARQVETEAAALDHATTYCIALVWTLQIYIWTGDLDTAAERLHTFKSIAEANAF 777
            D+A   A +    A +L H+ T C+ L+W  +++ W  +     E    ++++ + N F
Sbjct: 724 SDEAERVADEAIECARSLRHSATRCVTLLWAGEVFAWQENWPRLREIADEYEAVVQVNGF 783

Query: 778 GPYIAAATGFGAAVAIRAGRPGNAVAVLEETLARLHGMRYELLTTSFEMALAEGLILAGQ 837
            PY  A  G    +A   GRPG ++++LE  +  L    Y +  + F  +LA  L   G 
Sbjct: 784 TPYRFAVLGLRGQIAYADGRPGESISLLEGCIDGLVKCHYTMPASMFRNSLAIALCANGD 843

Query: 838 FEQALAQVEATIEHCRRSGDAFPLPELLRIQASIHKAQVPGDNKRPEALLQASLSLSQQQ 897
             +A+   +  I     + D   LP LL  +AS H+  + G++    A L+ +  ++++Q
Sbjct: 844 ARRAILVCDEAIRLIESNEDRLYLPTLLITKASAHR--IEGEHDASAACLREAFFVARRQ 901

Query: 898 GS 899
           G+
Sbjct: 902 GA 903