Pairwise Alignments

Query, 956 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 973 a.a., winged helix-turn-helix domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score =  401 bits (1031), Expect = e-115
 Identities = 310/951 (32%), Positives = 458/951 (48%), Gaps = 50/951 (5%)

Query: 27  KRLLTKDGTALDIGGRAFDLLIALLERPGRVVSKRELINLVWPDIIVEEGSLRFHMTGLR 86
           +R + + G ++ IG RAFD+L  L    G +VSK  +++ VWP  IVEE  L+ H+  LR
Sbjct: 13  QREIRQQGRSVRIGARAFDILEVLYRADGGIVSKDAIMDAVWPGSIVEENRLQVHIAALR 72

Query: 87  RILGDGEDGARYINTQVGVGYAFVAPIERAARPLPAPHSLHRGANGVGRLPP-RPSLIGR 145
           ++ G   +    I T  G GY  V+    A  P         G    G LP    +L+GR
Sbjct: 73  KLFGADRE---LIKTVPGRGYLLVSENRHARAP-----ERQTGTPTGGGLPACSATLVGR 124

Query: 146 NADVALVMERLRQPKLFTIVGPGGVGKTSLAVETGHCRAE--DDAVHFVDLAQVEGADLV 203
           + +VA +++RL Q  + T+VG GG+GKT LAV       E   + V FV+LA+    + V
Sbjct: 125 HVEVAQIVDRLGQASVVTLVGAGGIGKTCLAVHVARDMRERLGEPVCFVELAKASTREAV 184

Query: 204 PIALASSLGIAVQAEEPMQVLLAH-LRSQRLLLILDNCEHLIDAVCAIVEQIQDAAPGVT 262
              LAS+L I    +   Q  LA  L +   LL+LDN EH+ID +  +VE +   A  + 
Sbjct: 185 LKTLASALRIDACDDYLTQERLADTLAAAPCLLVLDNAEHVIDVIATLVEALTARAHTLR 244

Query: 263 LLATSREPLRARGEHVYRLNPLAFPSELQDLSVEQLLGFPAVQLFVERVCSSNAALALAP 322
           +L TSREPL    E V R+ PLA P+   D S   +L   AV+LF+ R  S         
Sbjct: 245 VLVTSREPLHIWAESVLRIEPLAVPAS--DSSARAILAHSAVELFLNRAKSVAPECGAEE 302

Query: 323 GDARLIADMCQRLEGMALPIELAAVRVAVHGVHATHALLGERFSLGWAGRRTALPRHQTL 382
              RL+ ++C+RLEG+ L IELAA RVA  GV    + L +R +L   G R+ALPRHQTL
Sbjct: 303 NTIRLVGEICRRLEGLPLAIELAAARVATLGVEGVASRLDDRLNLLTGGLRSALPRHQTL 362

Query: 383 RAMLDWSYDLLSANERLVFDRLAVFVGPFSLEAASHIAADDWIDPISVAATLDELAAKGL 442
           RA  DWSY LL A  R++F RL  F G F+ +A   +A +  +   +V ++L ELA K L
Sbjct: 363 RATFDWSYALLDATSRMLFRRLGFFAGAFTFDAVCTVATEPDMPVAAVISSLSELATKSL 422

Query: 443 VTVNRSSATASYRLLEMTRAYAREKLQVRGPSEVHALAFRHAAHHMEQLKH----LGETP 498
           +TV    A A YRL E TRAYA EKL+  G  E+  +A RH A+  E+++H    +G+  
Sbjct: 423 LTVEFCGAIAQYRLTESTRAYAMEKLRDEG--ELQRIASRHMAYLQERIEHGKQPVGDLA 480

Query: 499 HAIFASSARLGCQLGNIRSALEWSFGPQGDPGLALPLAAASAQLFLHFSLLVECRTWCTR 558
           H + A+  RL   L + R+A EW+F P G+P L + LA +     +  SLL EC     R
Sbjct: 481 HGLPAAEPRLA--LDDARAAFEWAFSPGGNPALGVALAGSLVGTLMQGSLLHECHERSGR 538

Query: 559 ATELLEL---GYFGTPTEMELQAALGLVLMFTKGNSAAAEKALLRALDIAVSLGEHRSQL 615
           A   L+    G   T  EM L +A    L+ + G    A     R L +A    +   + 
Sbjct: 539 ALAALDALPRGSVDTLCEMRLCSAYASTLLHSGGAMQEAGPLWKRVLLLARESRDEAFEA 598

Query: 616 RLLGRLQIFYERIGDFKASLVWAERAVEIGAVIGKPDAIAVAASLAGICYHLLGNQPLAR 675
           R L           D  AS  +A R        G P    +AA +  +  H  G    AR
Sbjct: 599 RALWGAWNSTLACSDIHASFRFATRFQAFAERCGTPWQQILAAEMIAVSLHCFGEHEQAR 658

Query: 676 QTLEHS------LRNSLPSQRSLTIHYGFDHRNRTGLALARTLWLMGFPDQARHGARQV- 728
             LE +      L ++ P + SL +    D  N     LAR +W+ G P+QA      V 
Sbjct: 659 ARLERAIAAMTELGSTAPGRMSLPV----DPYNFGNGTLARIVWMQGHPEQAMQLVENVV 714

Query: 729 -ETEAAALDHATTYCIALVWTLQIYIWTGDLDTAAERLHTFKSIAEANAFGPYIAAATGF 787
                  L+ + ++ +A V  + I +  G+L+ A+  L   +S    N F  + A A   
Sbjct: 715 NSIRPDMLEPSLSHVLA-VAAVPIALQCGELEAASRYLAVLQSQVALNRFEIWQAYAECH 773

Query: 788 GAAVAIRAGRPGNAVAVLEETLARLHGMRYELLTTSFEMALAEGLILAGQFEQALAQVEA 847
              + I  G P   +A LE  L RL    +  + T   +  AE L+ AG+  +A  +++ 
Sbjct: 774 AGHLDILQGHPHAGLAKLEAALQRLMSFGFRRVLTPMIVICAETLVRAGRIAEARTRLDE 833

Query: 848 TIEHCRRSGDAFPLPELLRI--QASIHKAQVPGDNKRPEAL----------LQASLSLSQ 895
            +E C+  G+ F + EL R+   A++ +A+V     R              L  ++  S+
Sbjct: 834 ALEFCQAHGEHFFIAELQRVLGVAALEQARVLQSGGRASMADEFETKGRRHLLDAIQTSR 893

Query: 896 QQGSRSWALRSAIDLAALWQAQGRDSEAQYLLGQHREQFSEGFDTHDLRLL 946
           +Q +    +R+ ++ A     +G  S A  LL    ++     +  D+R L
Sbjct: 894 EQHAPMLEVRAVLNFADHLLERGESSRAASLLVDVSKRIDMQSNAPDVRRL 944