Pairwise Alignments

Query, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 267 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 13/268 (4%)

Query: 2   KKLLLPLFAVALLAGCDKKAEEPTKPAAAAVSAIDRIKARDKLIVGVFTDKPPFGFVNEA 61
           ++  L + +VA+LA            AA A +A+D +     + + V TD PP+G V++ 
Sbjct: 9   RQFALAMVSVAMLAATG---------AAQAQNALDNVLKAKTIKIAVPTDYPPYGSVDKN 59

Query: 62  GRYVGFDTDIGRQFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPERKEA 121
            +  G D ++    A  L     KVE V V  A+RIP+LQ+ K DL+++ +   PER++ 
Sbjct: 60  MKPQGLDVEMAELIAAKL---GVKVELVPVTSANRIPYLQTRKADLVISTLGKNPEREKV 116

Query: 122 VDFTNPNLKVAVQALVPNDSAVKSLNDLATRTTIVTTGTTADIWLTK-NHPDWKLLKFEK 180
           +DFT+                + S  D+A +T  VT G   D  L K   P+    +FE 
Sbjct: 117 IDFTSAYAPFFQAVYAAKSMKLTSFADMAGKTVAVTRGAMEDQELNKVAPPNVDYRRFED 176

Query: 181 NSESLQALSAGRGDAYAQDNLVLFSWAKQNPGYRVLEEKLGDEAPIAPAVKKGNIELRDW 240
           N+ ++ A  AG+    A    V      +NP      + L  ++P    V KG   L+  
Sbjct: 177 NNATIAAFVAGQTQTIATSAAVAGDMLSKNPKVSAEFKLLLKDSPCFVGVAKGETALKTK 236

Query: 241 VNAELAKLGEEKFLLKLYDQYVRKELSD 268
           VN  +A   ++  L  +  +++ K   D
Sbjct: 237 VNEIIAAAKKDGTLDAMSKKWLGKAAGD 264