Pairwise Alignments

Query, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 76/230 (33%), Positives = 119/230 (51%), Gaps = 13/230 (5%)

Query: 38  IKARDKLIVGVFTDKPPFGFVNEAGRY-VGFDTDIGRQFAKDLLGDENKVEFVAVEPASR 96
           IK + +L+VGV     P  F++   R  VG++ D+    AK + G +  ++ +AV  A+R
Sbjct: 29  IKKKGELVVGVLGTDEPATFIDPKTRQIVGYEVDLVNAIAKKI-GVKPVLKQIAV--AAR 85

Query: 97  IPFLQSDKVDLILANMTVTPERKEAVDFTNPNLKVAVQALVPNDSAVKSLNDLATRTTIV 156
           IP LQ   VDL+ A +T   ER+  +DF+        +A+V  DS +  +  LA +  + 
Sbjct: 86  IPELQQGHVDLVAAGLTHNKEREAQIDFSLTTFVTGQKAIVKKDSGITEVPQLAGKKVLT 145

Query: 157 TTGTTADIWLTKNHPDWKLLKFEKNSESLQALSAGRGDAYAQDNLVLF-SWAKQNP---G 212
             G T +  + K  P+  ++ F+ + ++ QAL  G+G  Y  D   L  S+AK  P    
Sbjct: 146 IRGGTQEPNIRKAVPNVDVVTFDTSQQAFQALQQGKGVGYVDDEAALLRSYAKLGPQKAQ 205

Query: 213 YRVLEEKLGDEAPIAPAVKKGNIELRDWVN---AELAKLGE-EKFLLKLY 258
           Y VL++ L  EA +A  +KKG   L+  V+    EL K GE EK  +K Y
Sbjct: 206 YVVLKQNLSTEA-LAIGIKKGETALKAVVDDTLRELEKSGEAEKIFIKWY 254