Pairwise Alignments

Query, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 282 a.a., ABC-type amino acid transport/signal transduction system, periplasmic component/domain from Variovorax sp. SCN45

 Score = 85.9 bits (211), Expect = 9e-22
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 6/205 (2%)

Query: 28  AAAAVSAIDRIKARDKLIVGVFTDKPPFGFVNEAGRY-VGFDTDIGRQFAKDLLGDENKV 86
           AA A + +DRIK R K+ +GV  +  PFG ++ A +  +G++ D+ R  AK L  +   V
Sbjct: 28  AAHADATLDRIKQRGKVAIGVMVNGGPFGSIDPATQQLIGWNPDLARDLAKQLGAE---V 84

Query: 87  EFVAVEPASRIPFLQSDKVDLILANMTVTPERKEAVDFT-NPNLKVAVQALVPNDSAVKS 145
           E V V+P++R+ FLQS KVDL++A+M    +R E + +   P  +V   A V   S V  
Sbjct: 85  ELVQVQPSNRVQFLQSGKVDLLIASMEYNADRGEILGYAPTPFYRVGGTAAVLKTSGVAK 144

Query: 146 LNDLATRTTIVTTGTTADIWLTKNHPDWKLLKFEKNSESLQALSAGRGDAYAQDNLVLFS 205
             DL  +    + G++    L + +   ++  F+ +SESL AL  G   A   D+ ++  
Sbjct: 145 WEDLRGKIVCASQGSSFVKPLQEQY-GAQVRGFKTSSESLLALRGGNCVAAVHDSTLIQP 203

Query: 206 WAKQNPGYRVLEEKLGDEAPIAPAV 230
             + +  +      + DE   AP+V
Sbjct: 204 LLRSSAEWSGYAAPITDEILPAPSV 228