Pairwise Alignments

Query, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 264 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 93.2 bits (230), Expect = 5e-24
 Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 12/259 (4%)

Query: 10  AVALLAGCDKKAEEPTKPAAAAVSAIDRIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDT 69
           A+AL+AG  +         AA    +D IK   K+ V +    P F F +   +  G D 
Sbjct: 13  ALALVAGVAQ---------AAMADQLDDIKKAGKVRVAIAMGTPLFSFADANLQPTGSDV 63

Query: 70  DIGRQFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPERKEAVDFTNPNL 129
           D     AKDL     K+E V++  A+R+P LQ+ + DL++A++++TPER++ VDF+ P  
Sbjct: 64  DTATALAKDL---GVKLEIVSITNAARVPTLQAQRADLVIADLSITPEREKVVDFSVPYA 120

Query: 130 KVAVQALVPNDSAVKSLNDLATRTTIVTTGTTADIWLTKNHPDWKLLKFEKNSESLQALS 189
            +++    P    V    DL  +   +T  T  D   T+     +++++E ++  + ++ 
Sbjct: 121 VISIIVGGPKSIKVTDYADLNGKRIGLTRATVNDTLTTQQAKGAEIVRYEDDATLITSMV 180

Query: 190 AGRGDAYAQDNLVLFSWAKQNPGYRVLEEKLGDEAPIAPAVKKGNIELRDWVNAELAKLG 249
            G+ D ++     L    KQ P   +  +    +  +  A+ K   +L++WVN  +    
Sbjct: 181 TGQIDLFSSTPSNLSEMVKQAPAKNLELKFAQKDFDLGIALNKEQPKLKEWVNNWVVTNQ 240

Query: 250 EEKFLLKLYDQYVRKELSD 268
           +   L  +Y +Y  ++L +
Sbjct: 241 KNGKLNAIYKKYHGRDLPE 259