Pairwise Alignments

Query, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 258 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 93.2 bits (230), Expect = 5e-24
 Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 13/231 (5%)

Query: 8   LFAVALLAGCDKKAEEPTKPAAAAVSAIDRIKARDKLIVGVFTDKPPFGFVNEAGRYVGF 67
           LFA AL+            P  A    +  IKA+  + +    D  P+GF + AG+  G 
Sbjct: 7   LFAAALVCAA---------PLLAHADKLADIKAKGAIRIATTIDAAPWGFTDAAGKPTGL 57

Query: 68  DTDIGRQFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPERKEAVDFTNP 127
           D ++    AK +     K+E   V  A+RIP+L S+KVD+++A +  +PER + V F+ P
Sbjct: 58  DVELAENVAKAM---GVKLELQQVTGANRIPYLLSNKVDVVIAALGSSPERAKQVAFSKP 114

Query: 128 NLKVAVQALVPNDSA-VKSLNDLATRTTIVTTGTTADIWLTKNHPDWKLLKFEKNSESLQ 186
              V +       +     ++DLA +T  V  G+T D+ L++  P  KL++ E  + ++ 
Sbjct: 115 YAAVYLGVYGGKGTPKFAKVSDLAGQTVAVPKGSTPDLSLSELAPGAKLIRLEDTASTIS 174

Query: 187 ALSAGRGDAYAQDNLVLFSWAKQNPGYRVLEEKLGDEAPIAPAVKKGNIEL 237
           A  +G+   +A++N +    A +NP   +  + L   +P   AV+     L
Sbjct: 175 AFLSGQAPLFAENNFIAQKVADENPAKGIEMKSLIRISPAYMAVQPSETAL 225