Pairwise Alignments

Query, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 6e-28
 Identities = 76/239 (31%), Positives = 118/239 (49%), Gaps = 10/239 (4%)

Query: 28  AAAAVSAIDRIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVE 87
           AAA +       A +KL +G+    PPF   + +G  VGFD DIG     D L  + KVE
Sbjct: 11  AAATLVMSANAMAAEKLRMGIEAAYPPFNNKDASGNVVGFDKDIG-----DALCAKMKVE 65

Query: 88  --FVAVEPASRIPFLQSDKVDLILANMTVTPERKEAVDFTNPNLKVAVQALVPNDSAVKS 145
              V  +    IP L + K D +++++++T ERK+AVDFTNP     +Q + P +   K+
Sbjct: 66  CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDFKT 125

Query: 146 LNDLATRTTIVT-TGTTADIWLTKNHPDWKLLKFEKNSESLQALSAGRGDAYAQDNLVLF 204
             +      I T   T A  +L  N+PD ++  ++    +   L +GR D    D  V +
Sbjct: 126 DKESLKGKVIGTQRATLAGTYLEDNYPDVEIKLYDTQENAYLDLVSGRIDGILADKYVQY 185

Query: 205 SWAKQNPG--YRVLEEKLGDEAPIAPAVKKGNIELRDWVNAELAKLGEEKFLLKLYDQY 261
            W K   G  +    E + D   I  AV+KG+ +LRD +N  LA++  +    K+ D+Y
Sbjct: 186 EWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTKLRDDLNKALAEIKADGTYKKINDKY 244