Pairwise Alignments

Query, 520 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 468 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

 Score =  155 bits (391), Expect = 4e-42
 Identities = 117/384 (30%), Positives = 174/384 (45%), Gaps = 25/384 (6%)

Query: 119 RDKALIAHALAEVSASEDRLSNIINAIPGFVWSAAPDGSVGFVNQRWCDYTGMSLDEARG 178
           RD +   H   E + +      II      +   +PDG     +       G+  ++ RG
Sbjct: 94  RDASEERHGAREANRARRLYRLIIENTTDLISRHSPDGRFLDASPAAYRLLGLWPEQLRG 153

Query: 179 NGWARSVHPDDAEQLARYWGALLRSGEAGEYEARLRRFDGDYRWFLVRAVPQRDEW-GAV 237
                 +HP +  Q+ R   A L          R+R+  G YRWF + +   R+ + GAV
Sbjct: 154 MPVHTLLHPRERRQVLRQAAAALDQDGYHTMTCRVRQATGGYRWFEIASRAIRETYTGAV 213

Query: 238 LRWYGENTDIEDRKRAEMLAASIAVERQLSEETLSKVRSELAHLARVASLSTVTASIAHE 297
           +     + DI           ++ +E Q S          LAH AR+A+L  + + IAHE
Sbjct: 214 VEVVSVSRDI-----------TLRIEAQES----------LAHSARLATLGELASGIAHE 252

Query: 298 VNQPLAGIITNASTCLRMLGA---DPPNVTGALETARRTIRDGNRAAEVINRLRALFSKK 354
           +NQPLA ++  A+   R L     DP       +  +R       AAEVI RLRA   K 
Sbjct: 253 INQPLAAVVNYANASQRYLQGLERDPQARERVGQGLQRISEQATHAAEVIRRLRAFLRKG 312

Query: 355 CITLEPVDLNEAAREVIAMLLGELQRNDVKLHPEFADALPTVKADRVQLQQVILNMILNA 414
              L+ +D+ E A E + +   E  R+ V++    +  LP V ADRV L+QV+LN++ NA
Sbjct: 313 PRRLQALDVAELAGEAMRLCAWEAARDQVQVELRMSAQLPLVYADRVLLEQVLLNLLRNA 372

Query: 415 TEAMNTMTGRSRHLHVTTGLDEHQGVYLAVKDNGNGFDPRDAERLFQAFYTTKTTGMGIG 474
            +A     G      +     +  GV + V D G G  P   + +F  F T+K  G+G+G
Sbjct: 373 IDANREQQGERPSRILLCAARDGDGVLVEVADQGPGVAPERLDEIFTPFTTSKADGLGLG 432

Query: 475 LSISRSIIERHDGVLWATAHSGPG 498
           LS+SRS+IE   G LWA A    G
Sbjct: 433 LSMSRSLIEGFGGSLWARAGDNGG 456



 Score = 31.2 bits (69), Expect = 9e-05
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 52  VHPDDLPATLNSWREAVRNGEPYRKELRLQQADGGYRWFVSDGKPMRDNH-DRIIRWWVV 110
           +HP +    L     A+     +    R++QA GGYRWF    + +R+ +   ++    V
Sbjct: 160 LHPRERRQVLRQAAAALDQDGYHTMTCRVRQATGGYRWFEIASRAIRETYTGAVVEVVSV 219

Query: 111 SVDIDEHKRDKALIAHA 127
           S DI      +  +AH+
Sbjct: 220 SRDITLRIEAQESLAHS 236