Pairwise Alignments

Query, 123 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 453 a.a., Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake from Variovorax sp. SCN45

 Score = 70.5 bits (171), Expect = 3e-17
 Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 1/113 (0%)

Query: 2   EKPAL-IAVVDDDESVRESLPDLLREFGFAVEAFSSAPAFLSSPHVAATRCLILDVAMPG 60
           + PA+ + +V+DDE VR S   +L   GF VEAF+SA    +         +I DV +PG
Sbjct: 3   DDPAIRVLLVEDDEDVRLSTTQVLTLAGFEVEAFASAERARAHISFGVPAIVISDVRLPG 62

Query: 61  MSGPELHTTLTLRGLAIPVIFITAHGDAGDRQKLMRTGVVDCLMKPFSEAQLL 113
           MSG E    L      +PVI +T HG      + MR G  D + KPFS  +L+
Sbjct: 63  MSGTEWLGELHTADAELPVILVTGHGHIAMAVQAMREGAYDFIEKPFSSERLV 115