Pairwise Alignments

Query, 206 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 207 a.a., Two-component nitrogen fixation transcriptional regulator FixJ from Sphingobium sp. HT1-2

 Score =  129 bits (323), Expect = 5e-35
 Identities = 71/197 (36%), Positives = 117/197 (59%), Gaps = 10/197 (5%)

Query: 7   IVFVVDDDVSVRESLELLIRFAQWQPRLFESAQAFLSQPPADVPTCLVLDINLPDLNGLD 66
           ++ +VDD+ S+R++    ++ A +    + S   FL +  +    C++LD+ +P+++GL 
Sbjct: 6   VIHLVDDEESIRKAASFALKTAGYDVVTYASGVEFLKEAKSAAVGCVILDVRMPEMDGLG 65

Query: 67  LQAAIANERPDTPIIFITGYGDIPLTVRAMKAGAVEFLTKPFNDDVLLTAIAGALEKSRT 126
           +QA +A    + P+I +TG+GD+ + V+AMK GAV+FL KPF    LL    GA+ ++  
Sbjct: 66  VQAGMAARGVNMPVIVLTGHGDVSVAVQAMKGGAVDFLEKPFEKAALL----GAVSRAFA 121

Query: 127 LLDQQDQLRVLRAA-----YATLTPREQEVMTRVVAGHMNKVIAADLAISEITVKAHRGK 181
            LD  D LR L  +      A LTPRE+EV+  +  G  NK IA DL  S  TV+ HR  
Sbjct: 122 RLDDVD-LRTLETSEAGVRVAALTPREREVLEGLANGLPNKTIAYDLGCSSRTVEVHRAS 180

Query: 182 TMRKMKARSLADLVKMA 198
            M K++ R+L++ +++A
Sbjct: 181 LMAKLEVRNLSEALRIA 197