Pairwise Alignments

Query, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 635 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  251 bits (640), Expect = 8e-71
 Identities = 159/407 (39%), Positives = 236/407 (57%), Gaps = 8/407 (1%)

Query: 153 TQPGQTELVPKMGYTEYLPKWDMVIGTSVNLDGIEAQVAVVEAKVQKRMEGVLLSILGVA 212
           T+  + +L  +    +   + D ++G S  L   + Q    EA+ Q R +      LGV 
Sbjct: 237 TRLKEAQLTTEKSQNQLEQQLDQLLGQSDLLSQDQTQRRDHEAE-QARTQ-----TLGVT 290

Query: 213 VVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRRLAITSQDELGDLAGAFNR 272
              LL+      ++A  I+ PL    +  + IA  EGDL+  +    +DELG L  +  +
Sbjct: 291 AAALLLGVLAAWVIAGQIVTPLRKALSVANRIA--EGDLSHEVQTRRKDELGQLQHSMTQ 348

Query: 273 FVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHETDQVATAINQMSSAAQE 332
               + GL+  I++   Q+     ++S   +++   +  QR ET+QVA A+NQM + AQE
Sbjct: 349 MTLNLRGLIGNISDNAQQIASAAEELSTITEQTRAGVSNQREETEQVAAAMNQMLATAQE 408

Query: 333 VARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALVNDIRSSGVSLDSLQQDVSSIVSV 392
           VAR A+ AS+AA Q + +     +VV   +AQI  L +++  S  ++ +LQ++   I SV
Sbjct: 409 VARHAEQASIAAGQANHQTDLGDQVVTDVVAQIEHLAHEMARSSQAMLALQRESQKIGSV 468

Query: 393 LSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQTSTQEIQGMIDRL 452
           L VI+S+++QTNLLALNAAIEAARAGEAG+GFAVVADEVR+LA RTQ S +EI+ +I  L
Sbjct: 469 LDVIKSVSQQTNLLALNAAIEAARAGEAGQGFAVVADEVRSLAQRTQQSAEEIEELIGGL 528

Query: 453 QTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTINSMNAQIASAAEEQTAVA 512
            +GT+   + +  S    D +   A  AG +L  +A+ +  I  MN QIA+AAEEQ+AVA
Sbjct: 529 HSGTQQVADILDYSRTLTDNSVGLARNAGDALSEIARTVLVIQEMNPQIAAAAEEQSAVA 588

Query: 513 EEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQFRI 559
           EEINRSV ++  A +  A  ++  A  S  LA LG  L Q VGQF++
Sbjct: 589 EEINRSVLKVRDASEQTAAASEQTAAASIELARLGTDLQQCVGQFKV 635



 Score = 32.0 bits (71), Expect = 7e-05
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 459 AVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTINSMNAQIASAAEEQTAV-AEEINR 517
           AVE +R++ +  +  +     A +SLD  AQ +      N ++A AA  +  V +  +  
Sbjct: 169 AVENLRQAIEQAEDRAQSPAWAASSLDAYAQAVNDA-ERNLELAQAAVAKLPVDSTALKN 227

Query: 518 SVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQ 556
           +V +I   +  +  E QL   T +S  +L Q+L QL+GQ
Sbjct: 228 AVLEIRTRLTRL-KEAQL--TTEKSQNQLEQQLDQLLGQ 263