Pairwise Alignments

Query, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  258 bits (659), Expect = 5e-73
 Identities = 178/504 (35%), Positives = 264/504 (52%), Gaps = 31/504 (6%)

Query: 59  VEVAMSTIKPLYDAAAPGDTAARAQVVKLLSNTSYGKDGYFFGYDSETIRLFKGNSPDGV 118
           V +AM   K        G   +   +VK++++  +G  G+ F   S+  ++      D V
Sbjct: 151 VTIAMPVKKNGELLGVVGGDLSLQTLVKIINSVDFGGIGHAFLVSSDG-QVIVSPEQDQV 209

Query: 119 GKSFKDNRDPNGVY---VNRDLVKVGKDGTHYLQYSSTQPGQTELVPKMGYTEYLPKWDM 175
            K+ KD      V    V++D+V  G+D                  P  G    LP  D 
Sbjct: 210 MKNLKDIYPGTQVRIEKVSQDVVLNGQDRI------------LSFTPISG----LPGADW 253

Query: 176 VIGTSVNLDGIEAQVAVVEAKVQKRMEGVLLSILGVAVVLLLVIAAVGMLLANTILRPLH 235
            IG S++ D   A +          +  +L++++ +AV+L L+I          +LRPL 
Sbjct: 254 YIGLSIDKDKAYAPLGKFRTSA---LIAMLIAVVAIAVLLSLLI--------QVLLRPLT 302

Query: 236 LMKANLDDIAAGEGDLTRRLAITSQDELGDLAGAFNRFVDKIHGLVRQITEMTSQLTGLV 295
            M   + DIA GEGDLTRRL +TS+DE G++  AFN+FV++IH  + +++  T Q+  L 
Sbjct: 303 TMGVAMQDIAQGEGDLTRRLVVTSKDEFGEVGSAFNQFVERIHASISEVSSATRQVHDLS 362

Query: 296 SQVSDQAQRSEQAMERQRHETDQVATAINQMSSAAQEVARSAQGASVAAQQTDAEGQAAK 355
            +V   +  S    + Q   T+ VA AIN++ +A QE+AR+A  AS  A     +    +
Sbjct: 363 QRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQHASGASEQADDGR 422

Query: 356 RVVDGSIAQIHALVNDIRSSGVSLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAA 415
           +VV+ +I  +  L   I  S   +++L     +I  +L VI+ I++QTNLLALNAAIEAA
Sbjct: 423 KVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIEAA 482

Query: 416 RAGEAGRGFAVVADEVRALASRTQTSTQEIQGMIDRLQTGTEAAVEAMRRSSDAGDGTSA 475
           RAGEAGRGFAVVADEVR LA RTQ S +EI  MI  LQ G+  AV  M  S  + + +  
Sbjct: 483 RAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTSSEESVE 542

Query: 476 QANEAGASLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQL 535
            AN+AG  L ++ Q I  I+ MN  +A+A EEQTAV E +N  ++QI +           
Sbjct: 543 VANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQINLLNQQGVANLNE 602

Query: 536 GAQTSRSLAELGQRLGQLVGQFRI 559
             +   +L++   RL QLV  F+I
Sbjct: 603 TLKDCDALSQQANRLKQLVDSFKI 626