Pairwise Alignments

Query, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  263 bits (673), Expect = 1e-74
 Identities = 178/476 (37%), Positives = 252/476 (52%), Gaps = 25/476 (5%)

Query: 84  VVKLLSNTSYGKDGYFFGYDSETIRLFKGNSPDGVGKSFKDNRDPNGVYVNRDLVKVGKD 143
           +V+++++  +G  G+ F  D+    +   N  D V K+ KD    + + V   +  V  D
Sbjct: 193 LVEIINSVDFGGIGHAFLADANGQVIVSPNK-DQVMKNLKDIYPGSNLRVAAGMQDVTLD 251

Query: 144 GTHYLQYSSTQPGQTELVPKMGYTEYLPKWDMVIGTSVNLDGIEAQVAVVEAKVQKRMEG 203
           G         Q       P  G    LP     IG S++ D   A ++      Q R   
Sbjct: 252 G---------QDRIISFAPVAG----LPSAQWYIGLSIDRDKAYAALS------QFRTSA 292

Query: 204 VLLSILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRRLAITSQDEL 263
           ++  ++ VA      IA +  LL   ++ PL  M   + DIA GEGDLTRRLA+ ++DE 
Sbjct: 293 IIAMLIAVAA-----IAGLLGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEF 347

Query: 264 GDLAGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHETDQVATAI 323
           G+LA +FNRFV++IH  + +++  T  +  L  +V   +  S    E Q   T+ VA AI
Sbjct: 348 GELATSFNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAI 407

Query: 324 NQMSSAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALVNDIRSSGVSLDSLQ 383
           N++ +A QE+AR+A  AS  A     +    + VV+ +I+ + AL   I  S   +++L 
Sbjct: 408 NELGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLN 467

Query: 384 QDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQTSTQ 443
                I  +L VI+ I++QTNLLALNAAIEAARAGEAGRGFAVVADEVR LA RTQ S +
Sbjct: 468 ASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAE 527

Query: 444 EIQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTINSMNAQIAS 503
           EI  MI  LQ G+  AV  M  S  + + T   AN+AG  L ++ Q IG I+ MN  +A+
Sbjct: 528 EIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVAT 587

Query: 504 AAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQFRI 559
           A EEQTAV E +N  + QI        +      +    LA+   RL QLVG FRI
Sbjct: 588 ATEEQTAVVESLNLDITQINALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSFRI 643