Pairwise Alignments

Query, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

 Score =  273 bits (698), Expect = 1e-77
 Identities = 175/484 (36%), Positives = 267/484 (55%), Gaps = 25/484 (5%)

Query: 76  GDTAARAQVVKLLSNTSYGKDGYFFGYDSETIRLFKGNSPDGVGKSFKDNRDPNGVYVNR 135
           G   A   +V+++++ ++G  GY F  + +  ++      D V KS  D    +   +  
Sbjct: 166 GGDLALDGLVQIINSLNFGGMGYAFLVNDQG-KILVHPDKDLVMKSLSDLFPQHTPKLTG 224

Query: 136 DLVKVGKDGTHYLQYSSTQPGQTELVPKMGYTEYLPKWDMVIGTSVNLDGIEAQVAVVEA 195
           +L +V  DG            QT L+     T  LP  +  IG SV+ D   + ++    
Sbjct: 225 ELTEVQSDG------------QTRLLTFSPITG-LPSANWYIGLSVDKDKAFSMLSTFRT 271

Query: 196 KVQKRMEGVLLSILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRRL 255
                      +++   V ++++I  +G+L+   +++PLH M   ++DIA GEGDLT+RL
Sbjct: 272 S----------AVIATVVAVVIIIGLLGLLI-RVLMQPLHTMTRAMEDIAEGEGDLTKRL 320

Query: 256 AITSQDELGDLAGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHE 315
            I S DE G L  AFNRFV++IH  +R+++  T Q+  +  +V   +  S    + Q + 
Sbjct: 321 HIHSHDEFGVLGNAFNRFVERIHSSIREVSSATEQVNEVALRVISASNSSMTNSDEQSNR 380

Query: 316 TDQVATAINQMSSAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALVNDIRSS 375
           T+ VA AIN++ +AAQE+A +A  AS  A       +  ++VV+ +IA ++ L + I +S
Sbjct: 381 TNSVAAAINELGAAAQEIAGNAAQASQHASSARLLAEEGQQVVERNIAAMNRLSDLIVTS 440

Query: 376 GVSLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALA 435
              +++L     +I  +L VI SI++QTNLLALNAAIEAARAGEAGRGFAVVADEVR LA
Sbjct: 441 SAHIETLNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLA 500

Query: 436 SRTQTSTQEIQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTIN 495
            RTQ S Q++Q MI+ LQ G   +V+ M +S      +   AN+AG  LD++   IG I+
Sbjct: 501 HRTQESAQQVQTMIEELQVGARESVDTMEQSQRHSQDSMQIANQAGERLDSVTVRIGEID 560

Query: 496 SMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVG 555
            MN  +A+A EEQTAV E IN  +++I +      +  Q   +    L +   RL  LVG
Sbjct: 561 GMNQSVATATEEQTAVVEAINMDINEINMLNQEGVENLQATLRACSDLEQQAGRLKHLVG 620

Query: 556 QFRI 559
            FRI
Sbjct: 621 SFRI 624