Pairwise Alignments

Query, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  264 bits (675), Expect = 7e-75
 Identities = 157/355 (44%), Positives = 218/355 (61%), Gaps = 4/355 (1%)

Query: 205 LLSILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRRLAITSQDELG 264
           LL  LG A+  LL++     L A  + RP+  + A L+DIA+GEGDLTRRL    QDELG
Sbjct: 338 LLIGLGTAIAGLLLV----WLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELG 393

Query: 265 DLAGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHETDQVATAIN 324
            L G FNRF+DK+  ++ Q+     +      Q +  A ++   M++Q  E +QVATA N
Sbjct: 394 QLTGWFNRFLDKLQPVIAQVKGSLQEARNTADQSAAIASQTSDGMQQQHREIEQVATAAN 453

Query: 325 QMSSAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALVNDIRSSGVSLDSLQQ 384
           +MS+ A +VA +A  A+ AA+  D   Q   ++VD +   I  L   + ++     +L+ 
Sbjct: 454 EMSATALDVAHNASQAAQAARAADQASQEGLQLVDSTRQGIDRLAAGMNTAMDEARALED 513

Query: 385 DVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQTSTQE 444
               I SVL VIR+IAEQTNLLALNAAIEAARAGEAGRGFAVVADEVR LA RTQ S +E
Sbjct: 514 RSGQIGSVLEVIRTIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQVSVEE 573

Query: 445 IQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTINSMNAQIASA 504
           I+ +I+ LQ GT+  V AM         ++A+  +A  +L  + + +  I+ MN QIASA
Sbjct: 574 IRQVIEGLQQGTQDVVGAMHAGQRQAQDSAARMEQALPALQRIGEAVAVISDMNLQIASA 633

Query: 505 AEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQFRI 559
           AEEQ+AVAEE+NR+V  I    +S+A +    A+ S++L  L  +   L+ QFR+
Sbjct: 634 AEEQSAVAEEVNRNVAGIRDVTESLAGQADESARISQALNRLANQQQALMEQFRV 688