Pairwise Alignments

Query, 276 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 262 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase from Pseudomonas putida KT2440

 Score =  236 bits (602), Expect = 4e-67
 Identities = 127/273 (46%), Positives = 167/273 (61%), Gaps = 22/273 (8%)

Query: 1   MKKAVLLLAILMMTACVTAPENLIVKNGYAVDTTHTSPNQNERIRFLVLHYTVFDDKNSL 60
           +KK ++   +L +  C T         G  +D +H S NQ+ RI+F+VLHYT    + SL
Sbjct: 5   LKKTLISFLLLSVAGCST---------GLRIDRSHPSANQDNRIQFVVLHYTNASLERSL 55

Query: 61  DALTNGTASAHYLAYSTPHKHHNLPVVLQLVPEAKRAWHAGVSHWGNRANLNDTSIGIEI 120
             LT+G  S+HYL    P        V QLV E +RAWHAG S W  R  LN +SIGIEI
Sbjct: 56  ALLTHGEVSSHYLIGDGP------ATVYQLVDENRRAWHAGESQWQGRTWLNSSSIGIEI 109

Query: 121 VNAGFIEGPTGRLWFPYTEAQLALVKHLAADVIKRYAIEPQNVVGHSDIAPFRKSDPGPL 180
           VN GF + P GR+W PY+EAQ+  +  L  D++KR  IEP++++GHSDIAP RK DPGPL
Sbjct: 110 VNPGFTDTPNGRVWHPYSEAQVQALIALLKDIVKRNNIEPRHIIGHSDIAPLRKLDPGPL 169

Query: 181 FPWQALSEHGIGAWPDAVTVHK---HLAGRPESQTVDVSIVQRALATYGYTIPQSGVLDD 237
           FPW+ L++ G+G WPDA  V +   + +  P S    V   Q+ LA +GY I Q+GVLD 
Sbjct: 170 FPWKRLADAGLGIWPDANAVARQQAYFSVNPPS----VGWYQQELARFGYQIEQTGVLDV 225

Query: 238 ETRQVIRAFQMHFRPAGISGIPDAETEAVALAL 270
            TR V+ AFQM FRP    G+PDA+T A+   L
Sbjct: 226 ATRHVVAAFQMRFRPQRFDGMPDAQTAAMLQVL 258