Pairwise Alignments

Query, 276 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 183 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Escherichia coli ECRC62

 Score = 76.3 bits (186), Expect = 5e-19
 Identities = 42/97 (43%), Positives = 53/97 (54%), Gaps = 9/97 (9%)

Query: 87  VLQLVPEAKRAWHAGVSHWGNRANLNDTSIGIEIVNAGFIEGPTGRLWFPYTEAQLALVK 146
           ++Q VP  KRAWHAGVS +  R   ND SIGIE+          G     YT+AQ   + 
Sbjct: 84  IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL---------EGTDTLAYTDAQYQQLA 134

Query: 147 HLAADVIKRYAIEPQNVVGHSDIAPFRKSDPGPLFPW 183
            +   +I  Y    +N+ GH DIAP RK+DPGP F W
Sbjct: 135 AVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171