Pairwise Alignments

Query, 276 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 259 a.a., N-acetylmuramoyl-L-alanine amidase from Agrobacterium fabrum C58

 Score =  152 bits (384), Expect = 7e-42
 Identities = 92/235 (39%), Positives = 123/235 (52%), Gaps = 20/235 (8%)

Query: 37  SPNQNERIR-----FLVLHYTVFDDKN-SLDALTN--GTASAHYLAYSTPHKHHNLPVVL 88
           SPN  ER+       ++LHYT     + +L  L N     S+HY  +           V+
Sbjct: 20  SPNHGERLGVAGPDIILLHYTGMTTADGALSWLRNPESQVSSHYFVFEDGR-------VI 72

Query: 89  QLVPEAKRAWHAGVSHWGNRANLNDTSIGIEIVNAGFIEGPTGRLWFPYTEAQLALVKHL 148
           QLVPE++RAWHAG S W    ++N  SIGIEI N G    P G   FP  EAQ+A V  L
Sbjct: 73  QLVPESRRAWHAGKSSWAGDEDINSRSIGIEIANQGH---PGGLPEFP--EAQVAAVIEL 127

Query: 149 AADVIKRYAIEPQNVVGHSDIAPFRKSDPGPLFPWQALSEHGIGAWPDAVTVHKHLAGRP 208
             D  +R++I P+ V+ HSD+AP RK DPG  FPW  LS+HG+G W +   +      + 
Sbjct: 128 CRDCGRRWSIAPERVLAHSDVAPIRKVDPGEKFPWDILSQHGVGHWVEPAPIRGGRFFQR 187

Query: 209 ESQTVDVSIVQRALATYGYTIPQSGVLDDETRQVIRAFQMHFRPAGISGIPDAET 263
                 V  +Q  L+ YGY    +G   ++T   + AFQ HFRPA + GI D  T
Sbjct: 188 GDHGQPVEALQSMLSIYGYGAEITGAYCEKTEGAVAAFQRHFRPALVDGIADFST 242