Pairwise Alignments

Query, 439 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 465 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  101 bits (251), Expect = 6e-26
 Identities = 94/298 (31%), Positives = 139/298 (46%), Gaps = 37/298 (12%)

Query: 154 RQIGLVLGLAALLLVLILQRITV-----------RRALRPLETARNQIAQL---QQGQRS 199
           R +GL + L  L +VL +  ITV           RR L  L  A  +  Q+   Q+G R 
Sbjct: 159 RNLGLSVLLLLLKVVLPIMAITVTATLLATHFVVRRTLAGLNAAAARAGQIDADQRGVRL 218

Query: 200 QLDTQVPLELEPLVAQINHLLAHTEDSLKRSRNALGNLGHALKTPLAVLLSAASSDALKD 259
            L + VP E+  LVA  N  L   +D   R    L +  H L+TPLA+L +    D L D
Sbjct: 219 PL-SDVPGEVATLVAAFNDALQRLDDGHARHERFLADAAHELRTPLAILNTRL--DNLPD 275

Query: 260 RPELSKLLRD---------QLEHVQQRLNRELNRARLAGETLPGVLFDCEKELPGLLATL 310
             E ++LL D         QL  +Q+   RE  R R+        L D  +E+   +A L
Sbjct: 276 SAEKTRLLADAARLSVLAGQLLDLQRMKGREERRQRVD-------LVDMAREVVAEMAPL 328

Query: 311 SMIHGEHLDLNYHAASG-LQLPWDREDLLELLGNLLDNACKWADAEVRLTVTETGRNYLL 369
           ++  G   D+++   +G +++  DR+ L   L NL+ NA   A  +  + V       + 
Sbjct: 329 ALASG--YDISFEPQAGRVEIDGDRDALSRALTNLVRNAIDHAGGQGSVVVRVDASGDVD 386

Query: 370 AVEDDGPGIPETQRDQVFSRGTRLDEQIHGHGLGLGIVRDIVEVWGGVLQLQESELGG 427
            + DDGPGIP  QR  VF    R+     G GLGL +V++IV + GG + + +   GG
Sbjct: 387 VI-DDGPGIPPAQRAHVFKPFYRVHASGPGAGLGLSLVQEIVRLHGGEVSVHDGPEGG 443