Pairwise Alignments

Query, 439 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 452 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  166 bits (420), Expect = 1e-45
 Identities = 139/455 (30%), Positives = 217/455 (47%), Gaps = 36/455 (7%)

Query: 9   SLGLVSVMVIVGVVLAQTSLWLFEAGLQ----RYLEAGLRNDAENLLVALVRGPN-GVQL 63
           S  L S M++ G V    +L L  + +       +E G+R+D    L  L+   +   Q 
Sbjct: 3   SKSLKSRMIVAGAVWIFFALILAGSAISYMFIENVEKGVRSDLTATLSRLIAIIDLDAQQ 62

Query: 64  DEQRLS-----PAYQRPFSGHYFRIDFADTHW--RSRSLWDQELPRLPEVGIKGN----- 111
           D  RL+     P Y+ PFSG Y++I   D     RSRSLWD+ L    + G K       
Sbjct: 63  DRPRLTRQLPDPRYETPFSGVYWQITDVDNQQALRSRSLWDKNL----QTGAKNTDGEHF 118

Query: 112 -LQLGPEGQQLLVLRSDY----KRFGQPISISVAQDYTPVRESFRL----MRQIGLVLGL 162
               GP GQ LL L        +   +   I VAQD + + E+ R     M     VLG 
Sbjct: 119 ASVQGPAGQSLLALSLTTTFKARNLERHYQIVVAQDRSILDETIRKFAWEMAAALTVLG- 177

Query: 163 AALLLVLILQRITVRRALRPLETARNQIAQLQQGQRSQLDTQVPLELEPLVAQINHLLAH 222
           A+L+   + Q   VR  L P    ++++  +++G  S L ++ P E+ PLVA++N LL  
Sbjct: 178 ASLVFAALFQ---VRFGLLPFRQLKSEVETIRKGAASSLGSEYPTEVYPLVAEVNELLKL 234

Query: 223 TEDSLKRSRNALGNLGHALKTPLAVLLSAASSDALKDRPELSKLLRDQLEHVQQRLNREL 282
            E S++ +R    +L H LKTPL+VL + A     +     + +L D  + +  R++ +L
Sbjct: 235 QETSIEFARARASDLAHGLKTPLSVLATIAYELENRGETSAASVLFDLSDEMNSRIDYQL 294

Query: 283 NRARLAGET-LPGVLFDCEKELPGLLATLSMI-HGEHLDLNYHAASGLQLPWDREDLLEL 340
             ++L     L  +       +   +A L     GE L         + +  D  DL+EL
Sbjct: 295 KLSKLRQRARLHSLRAPLGSIVNRAVAVLKKTKEGEQLHWQIEMTQNIDVDLDENDLVEL 354

Query: 341 LGNLLDNACKWADAEVRLTVTETGRNYLLAVEDDGPGIPETQRDQVFSRGTRLDEQIHGH 400
           +G LL+NA KWA ++V ++ +       L V DDGPGI ++Q + +  RG R DE + G 
Sbjct: 355 VGILLENAAKWATSKVHVSASMQDYVAELRVHDDGPGIGQSQLELIGKRGQRFDESVGGS 414

Query: 401 GLGLGIVRDIVEVWGGVLQLQESELGGLKVLIELP 435
           GLGL I R+I+ +  G +  +  +  G  V++ LP
Sbjct: 415 GLGLAIAREILAINHGSITFESGQGMGTLVIVRLP 449