Pairwise Alignments

Query, 439 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 452 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  159 bits (402), Expect = 2e-43
 Identities = 138/450 (30%), Positives = 203/450 (45%), Gaps = 28/450 (6%)

Query: 3   SIQRRLSLGLVSVMVIVGVVLAQTSLWLFEAGLQR-YLEAGLRNDAENLLVALVRGPNG- 60
           SI RRL++  V + V   V++A   L+L  AG+ R  ++  L    E L  AL     G 
Sbjct: 11  SISRRLTVFSV-IFVTASVMIASIILYLIVAGVVREQIDQRLDTQIEGLRSALSIDEAGR 69

Query: 61  VQLDEQRLSPAYQRPFSGHYFRIDFADTHWRSRSLWDQELPRLP---------EVGIKGN 111
           V L+     P + R  SG Y++I        SRSL  Q L   P         E G +  
Sbjct: 70  VTLNAALDGPPFDRRGSGWYWQIRGEGVAITSRSLAGQSLDNPPSPFNWGKMMEHGPRPG 129

Query: 112 LQLGPEGQQLLVLRSDYKRFGQPISISVAQD-----YTPVRESFRLMRQIGLVLGLAALL 166
           +     GQ L  LRS     G  +    A         P R +   +     +LG A+L+
Sbjct: 130 VNAELHGQDLY-LRSIQTMVGAKLIEITATAPRFALVAPARSALLWLIPAMTLLG-ASLV 187

Query: 167 LVLILQRITVRRALRPLETARNQIAQLQQGQRSQLDTQVPLELEPLVAQINHLLAHTEDS 226
             + LQ   VR  LRPL      I+ +  G   +L      EL P   +IN L+    + 
Sbjct: 188 AGIFLQ---VRYGLRPLRQLTADISSISAGTLERLPDADVQELRPASREINRLVEQNSER 244

Query: 227 LKRSRNALGNLGHALKTPLAVLLSAASSDALKDRPELSKLLRDQLEHVQQRLNRELNRAR 286
           L  +R    NL H LKTP+  L  A     L D  +    +R  ++ + QR+   L RAR
Sbjct: 245 LTETRLHFANLAHGLKTPVTSLYLA-----LNDTNDPDNTMRALVDRIDQRIRHHLARAR 299

Query: 287 LAGETLPGVLFDCEKELPGLLATLSMIHGEH-LDLNYHAASGLQLPWDREDLLELLGNLL 345
                           +  +L  ++ I+ +  +         L++    EDL E++GN+ 
Sbjct: 300 KTAAGGVAATTPVRPRVDDILEIMTHIYADRGVVATVEVDDTLRVQVGPEDLDEIIGNIT 359

Query: 346 DNACKWADAEVRLTVTETGRNYLLAVEDDGPGIPETQRDQVFSRGTRLDEQIHGHGLGLG 405
           DNA KWA   VR++  +TGR+ LL + DDGPGI      +VF  G R+DE + G G GL 
Sbjct: 360 DNAFKWAKGRVRISARQTGRDILLTISDDGPGIDNALVSEVFEPGRRMDETVPGDGFGLT 419

Query: 406 IVRDIVEVWGGVLQLQESELGGLKVLIELP 435
           IV+++VE+ GG + ++ +  GGL  L+ LP
Sbjct: 420 IVKELVELHGGRISMERNGDGGLTCLLTLP 449