Pairwise Alignments

Query, 222 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 225 a.a., transcriptional activator protein from Pseudomonas putida KT2440

 Score =  160 bits (406), Expect = 1e-44
 Identities = 95/223 (42%), Positives = 125/223 (56%), Gaps = 4/223 (1%)

Query: 1   MRLLLVEDNVPLADELLAGLQRQGYAVDWLADGRDAAYQGRSEPYDLIILDLGLPGLPGL 60
           M+LL+ ED       L  GL   G+ VD +  G DA     SE YDL+ILD+ +PGL G 
Sbjct: 1   MKLLVAEDEPKTGAYLQQGLAEAGFTVDRVLTGTDALQHALSESYDLLILDVMMPGLEGW 60

Query: 61  EVLAQWRAAALATPVLILTARDSWAERIEGLKAGADDYLSKPFHPEELYLRIQALVRRSH 120
           EVL   RAA    PVL LTARD   +R++GL+ GADDYL KPF   EL  R++ L+RR  
Sbjct: 61  EVLRMVRAAGKDVPVLFLTARDGVDDRVKGLELGADDYLIKPFAFSELLARVRTLLRRGT 120

Query: 121 GQANQPTLQSAGLHLDEGRQCVLRDGAEIPLTAAEFRLLRYFMLHPEQILSKSHLAEHLY 180
             A Q T++ A L +D  ++   R G  I LTA EF LL   M    ++L KS +A  ++
Sbjct: 121 STAAQTTMKMADLEVDLLKRRATRSGKRIDLTAKEFSLLELLMRRRGEVLPKSLIASQVW 180

Query: 181 DGETERDSNVLEVHVNHLRRKL----GRSVIETRRGQGYRFGA 219
           D   + D+NV+EV +  LR K+       +I T RG GY   A
Sbjct: 181 DMNFDSDTNVIEVAIRRLRAKIDDDFAPKLIHTARGMGYMMDA 223